Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0643 ATGGAAATGACAAGACCTGGCTATGCGGTTGTTTATGTCATTCTCCTTTGCGCCTTGGCTAACGGTGGCTCCCACGGCAAGAGGTGGAAGCCGGAGGAGTTTCTCCAAGATGCCCCTGCTTTCTCCCCCACGACGTCGTTTCATGATGACGGAgataagGTACAACATGCTTGGAGACATTGTATGGAAGAATTAATAGACAGGAAGGAAACAGAATCTCTGCCTCCTCAAACTCATCAAATCCTTCTGGATTGTGTGAGAACCAAGACTTCAAATGTTCATGTTTCTGAAGAGAATACAGGTTCTAGACCTTTTTTAACCAAATATTGGACTACTAGCGGTCTTGGAATTGGAAGGCATTTGCTTGCTGACTCACCAGATAACCAGAAACCACCATCCACTACtccttctccatctccatcttcatCCTCATCTCCATCTTCATCCTCATCCCCTTCTCCATCTTCCGCCCCttctccatcttcatcttcatctccaTCTCCAACAAGAGATGATGAGAAACCAGCTGATGATGATTCTTCTTCATCTAAGGACAAGGACAACTCTTTTGATTCTAATCTCCCACCAAATATGTTTACACCatttccaccaccaccacgacgTCCTCCTTCTCCTAGACTGCCTCCACCCAAACCTTTAGTGTATGCTCCTCCAGAACCCAAACAGGATGACTATCAGGTGCAGGTAATTGTTTTTTGTGTTGCTGTGGCAGTGTGTGCTACTCAGAAGTTTGCTGGTTCTGAAAATTTTGATAAGAGAGAATCTAGTACTATGGTCAGAAATATGTCCACAAAGCCTGAAGATAGCTCACTGGGTGAAACATCATCATCTGGAGATGTAGTACAAGTACCAGAACTTCCTCCAAACCCTCCTCCGGCAGCTCCTCCACCCCCGGGGCCGGCACCGCCACCGGCTCCTCGCGCCCCACCACCTCCTAAAGCTGCTAAGGCTCCACCTCTTCCAAAACCAATGCATGGTAAAAACAAAAGTAGTGGTGACCAGGGCAGTTTTGGTGAGGGAGGTGATTCGGATAAACCCAAATTAAAGCCATTTTTCTGGGATAAGGTGAATGCAAAAGCTGATCAAGGAATGGTCTGGCATCAAATCAATGCAGGGTCATTCCAGTTCAATGAGGAAATGATAGAGTCTTTATTTGGTTGTGCCAATCAGAACAAAAATGAACGCAAGAGATCAGAGGAACCTGCAATTCAGTACATTCAGGTTATTGACCCTAGAAAAGCTCAGAATCTATCAATCCTTTTGCGAGCACAGAATGTGACAACAGAGGAAGTTATGGATGCCCTTAAACAAGGTAATGAGATTCCCGGTGAGATAATTCACACAATACTGAGGATGGCACCAACACAAGAAGAGGAATTAAAGCTTCGGTTATTCAAGGGGGAGCTCAATCGACTTGGCCCTGCAGAGAGATTCCTCAAGGTTTTAGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTTTGCAGTTCATGGTCACCTTTGCAGAAGAGTTCTCAAATCTCAAGGATTACTTTACAACACTAGAGGTTGCTTGCAACAAGCTCAGAAAAAGCAGGCTATTCCTGAAACTACTAGAAGCAGTTCTGAAAACCGGAAATCGCATGAACGACGGAACCTACCGCGGCGGTGCTCAAGCATTCAAGCTAGACACACTCTTGAAACTGTCCGACGTAAAAGGAATCGATGGCAAAACAACGCTATTACACTTCGTGGTCCTGGAGATCATACGTTCCGAAGGCGTAAGAGCCGTACGAGCAGAGAAAGCTAGCCAAGCGAGCAGCGGTAGTGTCAAAACAGAGGATTTCCACGAAGATCACACCAACGAAGAATCAGCAGCGGATCATTACCGCCGCCTCGGGCTCCAAGTCGTTTCAGGCTTAAGCGGCGAACTCGAAGACGTCAAAAGGGCAGCGGTTATAGACGGCGAAGGAATAACATCTTCGGTGTCGAAATTGGGACAATCGTTGCTAAAGTCCAAAGAATTCCTCAATAACGAGATGAAGGATCTGGATGAAGACAGCGAATTCCACCGTTCTCTGAGGAGCTTCGTGGAGAAAGCGGAGGCAGAGGTGACGTGGCTGTTGGAGGAAGAGAAGAGGATAATGGCGCTGGTGAAGAACACAGGGGATTATTTCCACGGCACCGCGGGGAAAGACGAAGGGTTGCGTTTGTTCGTGGTTGTACGAGATTTCTTGGTAATGTTGGATAAGGCATGTAGAGAGGTGCAAGATACAACAATGAAAGCGGCCGCAGCGAATAAGGCTTCCAAGAAAGAGACTCCAACTACCGCCGCCTCATCATCTCCTAAGGAAACTCGACCGCCGCCTGATCAGAATGATATACACAGGCGACTGTTTCCAACCATCGCAGGGCGGCGCGTGGATTTCTCAGATTCTGATTCTGATTATGACGATGATAGCTCATCTCCATAG 2475 0.4549 MEMTRPGYAVVYVILLCALANGGSHGKRWKPEEFLQDAPAFSPTTSFHDDGDKVQHAWRHCMEELIDRKETESLPPQTHQILLDCVRTKTSNVHVSEENTGSRPFLTKYWTTSGLGIGRHLLADSPDNQKPPSTTPSPSPSSSSSPSSSSSPSPSSAPSPSSSSSPSPTRDDEKPADDDSSSSKDKDNSFDSNLPPNMFTPFPPPPRRPPSPRLPPPKPLVYAPPEPKQDDYQVQVIVFCVAVAVCATQKFAGSENFDKRESSTMVRNMSTKPEDSSLGETSSSGDVVQVPELPPNPPPAAPPPPGPAPPPAPRAPPPPKAAKAPPLPKPMHGKNKSSGDQGSFGEGGDSDKPKLKPFFWDKVNAKADQGMVWHQINAGSFQFNEEMIESLFGCANQNKNERKRSEEPAIQYIQVIDPRKAQNLSILLRAQNVTTEEVMDALKQGNEIPGEIIHTILRMAPTQEEELKLRLFKGELNRLGPAERFLKVLVDIPFAFKRLESLQFMVTFAEEFSNLKDYFTTLEVACNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGIDGKTTLLHFVVLEIIRSEGVRAVRAEKASQASSGSVKTEDFHEDHTNEESAADHYRRLGLQVVSGLSGELEDVKRAAVIDGEGITSSVSKLGQSLLKSKEFLNNEMKDLDEDSEFHRSLRSFVEKAEAEVTWLLEEEKRIMALVKNTGDYFHGTAGKDEGLRLFVVVRDFLVMLDKACREVQDTTMKAAAANKASKKETPTTAASSSPKETRPPPDQNDIHRRLFPTIAGRRVDFSDSDSDYDDDSSSP 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0643 824 MobiDBLite consensus disorder prediction 120 227 - -
Sto7g0643 824 PANTHER FORMIN-RELATED 247 818 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto7g0643 824 PANTHER FORMIN-RELATED 1 242 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto7g0643 824 MobiDBLite consensus disorder prediction 764 824 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 612 626 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 770 788 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 140 169 - -
Sto7g0643 824 PANTHER FORMIN-LIKE PROTEIN 1 242 - -
Sto7g0643 824 PANTHER FORMIN-LIKE PROTEIN 247 818 - -
Sto7g0643 824 PRINTS Proline rich extensin signature 129 141 - -
Sto7g0643 824 PRINTS Proline rich extensin signature 142 163 - -
Sto7g0643 824 PRINTS Proline rich extensin signature 202 219 - -
Sto7g0643 824 PRINTS Proline rich extensin signature 286 311 - -
Sto7g0643 824 SMART it6_source 345 764 IPR015425 -
Sto7g0643 824 Gene3D Formin, FH2 domain 354 787 IPR042201 -
Sto7g0643 824 MobiDBLite consensus disorder prediction 263 289 - -
Sto7g0643 824 ProSiteProfiles Formin homology-2 (FH2) domain profile. 345 775 IPR015425 -
Sto7g0643 824 MobiDBLite consensus disorder prediction 170 186 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 197 224 - -
Sto7g0643 824 SUPERFAMILY Formin homology 2 domain (FH2 domain) 303 764 - -
Sto7g0643 824 Pfam Formin Homology 2 Domain 351 749 IPR015425 -
Sto7g0643 824 MobiDBLite consensus disorder prediction 291 326 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 250 356 - -
Sto7g0643 824 MobiDBLite consensus disorder prediction 601 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0643 Sto-Chr7 4721537 4725209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0643 349 809 FH2 protein (formin) Gene Family AT5G54650 61.505 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0643 - - gmx:100780844 624.009