Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0631 ATGAGATCCAATGCATCTTCCATTACCACTACACCTAAGCTTGCTCTGCATCGGCAATGTCGAAACTTTAGACTCCCGGCAATTCTTGCGGTCTTCATACGTCCCAATCCGAAAGACCCAGACATCCTCTGTAAACTTGCAAGAGAAACTTCAACGAATGTAACCAGACCAGACATCTTCGGAGTCAACGCTCCGGGCTCCATCACTCGACACAGACGGAGTGCAAATTGCATGCACAAATTAGAGAAACCCCATACCAAAGGGGATGGATCATCTAAGTCCCTGGCCGAGACGCTGGCGAGATGGAAAGAATATAATGCCCGGCTCGACTCTAGCAATGATGCGGATAAGCCGATCCGGAAAGTTCCTGCGAAAGGATCAAAGAAGGGGTGTATGAAAGGGAAAGGAGGGCCCGAGAACTCACGGTGTAATTACAGAGGTGTAAGGCAGAGGACATGGGGTAAGTGGGTTGCTGAAATAAGGGAGCCGAATAGGGGAAGTAGGCTGTGGTTGGGTACATTTCCCACTGCCATTGGAGCTGCTCTTGCTTATGATGAAGCAGCAAGAGCATTGTATGGTTCTTGTGCACGCCTCAACTTTCCCAATGTTTCAGTTTCCAATTTTTCAGATGAATCTGCATCTGTGATGCCAACATCATCAGCACGTACAGAGTCCGTGAAATCCCGGAACGACACTGAGTTTTGTGCCTTGGAGGATAATGAGAAGAAACCTGTTTCAGTTAATGTAAAACttgaagaaggggaagttgaatCTACCATCAGTTCTTCCACGCCTTCATCTTCATGA 807 0.4647 MRSNASSITTTPKLALHRQCRNFRLPAILAVFIRPNPKDPDILCKLARETSTNVTRPDIFGVNAPGSITRHRRSANCMHKLEKPHTKGDGSSKSLAETLARWKEYNARLDSSNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARALYGSCARLNFPNVSVSNFSDESASVMPTSSARTESVKSRNDTEFCALEDNEKKPVSVNVKLEEGEVESTISSSTPSSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0631 268 MobiDBLite consensus disorder prediction 209 225 - -
Sto7g0631 268 MobiDBLite consensus disorder prediction 226 250 - -
Sto7g0631 268 Pfam AP2 domain 143 193 IPR001471 GO:0003700|GO:0006355
Sto7g0631 268 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 80 248 - -
Sto7g0631 268 SMART rav1_2 144 207 IPR001471 GO:0003700|GO:0006355
Sto7g0631 268 Gene3D AP2/ERF domain 144 203 IPR036955 GO:0003700|GO:0006355
Sto7g0631 268 MobiDBLite consensus disorder prediction 113 143 - -
Sto7g0631 268 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 80 248 - -
Sto7g0631 268 MobiDBLite consensus disorder prediction 209 268 - -
Sto7g0631 268 ProSiteProfiles AP2/ERF domain profile. 144 201 IPR001471 GO:0003700|GO:0006355
Sto7g0631 268 CDD AP2 143 203 IPR001471 GO:0003700|GO:0006355
Sto7g0631 268 SUPERFAMILY DNA-binding domain 144 201 IPR016177 GO:0003677
Sto7g0631 268 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Sto7g0631 268 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0631 Sto-Chr7 4635541 4637078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0631 92 264 AP2-EREBP Transcription Factor Family AT2G40340 48.588 6.45e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto7g0631 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0631 - - gmx:100499747 249.21