Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0623 ATGGCCAAGTCTCCATCCATGAATGAGATTCTGCCACGCAAGCAAATCGGAATCTGTACGATGCCTATGTGCCACAGTTCATCCAACCTGCAccctaagagagagaaagaatacACCAAATTCCGGAAAAACCAACCAATAGCAGAGAGAAAAATCCAAGACCCAAACATTGTTCGTAAGGAGGAAATGAAGAACTGCGAGTTGTGCAAGGTTCCGGCGAGAACCTACTGCGAGTCTGACCAGGCAAGCTTGTGCTGGGACTGCGATTCTAAGGTCCACGGAGCAAACTTCTTGGTAGCTAGGCACTCTAGAACACTCTTATGCCGTGCCTGTCAGTCTATCACGCCGTGGAAAGCCTCCGGTCCTAAGCTCGGAAACACCGTTTCTTTCTGCGAGAGTTGTGCCGGTGGAATGAAGGTTATCGgcgaagaaagagaagagagcgAAGGCGGCAATGACGACGACATAGACACAGAGGGCGATCTTAGTGACGACGAAGACGACGACAGCGACGaagatgacgatgatgatgacGGTGGTGACGGCGACGCCGAGGTTGGTGGTGACGAGGATGGAGATAATCAGGTAGTTCCTTTGTCCTCCACGCCACCTCCGCCGGCTTCTAATTCCTCGAGTAGCCAAGAGTCGGTTAGCAGGTGTAATAACAATAGTAGGGATCTTTCTGAGACAGTAAATACAAGTTCGTTGAAACGAAGGCGTGAGGACGCGTCGGATCAGAATTTCCAGGATGGTTCGAAGCGTCCATCTATTCAACAAAGGTACGGTGCGGAATTGAGGAAACAGGTTGCTTGGTTATCTTCTTTAGGCGGCGGAGGAGCGTCGACGGAGTCGCCGAGGTTCTTGAAAGACGCAGAAATCGGATCGGCGTCGTCGGACGAATCCCTGGATGGATTGAACGGCCCACAATGTTCCAGCGATGGCAAAACGCCGGAAGCCGTTTGA 963 0.4849 MAKSPSMNEILPRKQIGICTMPMCHSSSNLHPKREKEYTKFRKNQPIAERKIQDPNIVRKEEMKNCELCKVPARTYCESDQASLCWDCDSKVHGANFLVARHSRTLLCRACQSITPWKASGPKLGNTVSFCESCAGGMKVIGEEREESEGGNDDDIDTEGDLSDDEDDDSDEDDDDDDGGDGDAEVGGDEDGDNQVVPLSSTPPPPASNSSSSQESVSRCNNNSRDLSETVNTSSLKRRREDASDQNFQDGSKRPSIQQRYGAELRKQVAWLSSLGGGGASTESPRFLKDAEIGSASSDESLDGLNGPQCSSDGKTPEAV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0623 320 MobiDBLite consensus disorder prediction 274 320 - -
Sto7g0623 320 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 63 265 - -
Sto7g0623 320 Pfam B-box zinc finger 62 104 IPR000315 GO:0008270
Sto7g0623 320 MobiDBLite consensus disorder prediction 206 231 - -
Sto7g0623 320 MobiDBLite consensus disorder prediction 299 313 - -
Sto7g0623 320 CDD Bbox1_BBX-like 66 107 - -
Sto7g0623 320 ProSiteProfiles Zinc finger B-box type profile. 61 107 IPR000315 GO:0008270
Sto7g0623 320 PANTHER - 63 265 - -
Sto7g0623 320 MobiDBLite consensus disorder prediction 232 248 - -
Sto7g0623 320 MobiDBLite consensus disorder prediction 147 190 - -
Sto7g0623 320 SMART bboxneu5 61 107 IPR000315 GO:0008270
Sto7g0623 320 MobiDBLite consensus disorder prediction 142 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0623 Sto-Chr7 4599794 4601507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0623 64 182 C2C2-CO-like Transcription Factor Family AT4G27310 54.167 4.46e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto7g0623 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0623 - - lang:109338335 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0623 7 4599794 4601507 Sto12g0557 12 3600655 3601233 CCT
Sto7g0623 7 4599794 4601507 Sto7g0623 7 4599794 4601507 ECH