Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0615 ATGGCTGCTGGAATTGGCGCCAACTCCCCAAGTCTAGCAAGGTGTGGAAAGAGTTGCAGATTGAGGTGGCTAAATTACCTGAGGCCCAACATCAAAAGAGGGAACTATACTCCAGAAGAAGAGCAAACGATTATGAAGCTGCATCACAAGTTGGGCAACAGATGGTCTGCAATTGCGGGAGAGCTACCGGGAAGAACAGATAATGACATAAAGAATCATTGGCACACCAACCTCAAGAAGCGCTCTCTTCACCATAACGAAATTGAATCCAAGCAATCATCGGAGAACAATCTAGAATCACCACCAATTAACAACAATAGTGGTCCAGCTTCTTCTAATGATCACACGCCGGCATATTCTTGTCCTCTCTCCCCTCAATCGTCTTCCAGCGAATTCTCCTCCACAACCAATTACATCAATCAATTCAGTAATTTAGAGGAGTTTCTGGAATTTGATGAGTTTGCTTTTCTGGAAGCTTCCACCACTACTAGTACTAGTACTACCACATATGGAAATTTCTGGACGGACCCTTACGTGGCTGATATTTTCTCCGACGTCCTAACTGATGAAATTGTCTCGCTTCCATcgcctcatcatcatcatttctaTGCTACTCATGGCTTCTTCTGA 630 0.427 MAAGIGANSPSLARCGKSCRLRWLNYLRPNIKRGNYTPEEEQTIMKLHHKLGNRWSAIAGELPGRTDNDIKNHWHTNLKKRSLHHNEIESKQSSENNLESPPINNNSGPASSNDHTPAYSCPLSPQSSSSEFSSTTNYINQFSNLEEFLEFDEFAFLEASTTTSTSTTTYGNFWTDPYVADIFSDVLTDEIVSLPSPHHHHFYATHGFF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0615 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 82 IPR017930 -
Sto7g0615 209 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Sto7g0615 209 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 182 - -
Sto7g0615 209 SMART sant 32 80 IPR001005 -
Sto7g0615 209 MobiDBLite consensus disorder prediction 93 132 - -
Sto7g0615 209 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 12 182 - -
Sto7g0615 209 MobiDBLite consensus disorder prediction 77 92 - -
Sto7g0615 209 Gene3D - 4 32 - -
Sto7g0615 209 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
Sto7g0615 209 MobiDBLite consensus disorder prediction 77 132 - -
Sto7g0615 209 CDD SANT 35 78 IPR001005 -
Sto7g0615 209 Gene3D - 34 103 - -
Sto7g0615 209 Pfam Myb-like DNA-binding domain 33 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0615 Sto-Chr7 4540458 4541368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0615 12 81 MYB Transcription Factor Family AT2G31180 80.000 4.01e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g0615 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0615 K09422 - gmx:100778518 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0615 7 4540458 4541368 Sto7g0615 7 4540458 4541368 ECH