Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0614 ATGGTGAGAACACCTTCGTTTGACAAAAGTGGACTGAAGAAAGGAACATGGACTCCCGAGGAAGATAGGAAGCTAATTGCTTATGTTACTAGATATGGCTGCTGGAATTGGCGCCAACTTCCCAGATGGTCAGTGATTGCAACTCATTTGCCGGGAAGAACCGATAACGAAATAAAGAACCACTGGCACACCACTCTCAAGAAACGCTTTGAACCACACAActcaacatcatcatcatcatcatcatcgaaAAAGTCAAAGGACACCTCCACGTCATCATCTCCAACAGAACTTGCTACTAATTCACAAATCGAAATCCTAGATTCGAGCCCATTGTCTCCCCAGTCAATATCTTCTAGCTCCATAACCACTACAGCTACTGTGCCTTTGTCGGCCCAAGATTTTTGGGCCGACCTGATGGTTGATGACATCTCCTACGTCCCAACCCAATCCACAAGCATCACCGACACGTGTGCATCTGCTTTGGAGACATTGTGCTCAGAAATTGATTTGGGTGTGGAGGATgagtttgggtttttgggtaaCCTTTCGGAGGCAGCATTTGACAATTTTCTGATGGATCAGCCGCATTTCCCTGCCGTCTCATCACAAACACCATTACTCTCCGAATTAGATAATGATTTTTGTCCGCTCTATGATTTAGATCTTTGGAGTCAAACTAATTATTTGTATGTTTGA 699 0.4134 MVRTPSFDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRWSVIATHLPGRTDNEIKNHWHTTLKKRFEPHNSTSSSSSSSKKSKDTSTSSSPTELATNSQIEILDSSPLSPQSISSSSITTTATVPLSAQDFWADLMVDDISYVPTQSTSITDTCASALETLCSEIDLGVEDEFGFLGNLSEAAFDNFLMDQPHFPAVSSQTPLLSELDNDFCPLYDLDLWSQTNYLYV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0614 232 SUPERFAMILY Homeodomain-like 3 74 IPR009057 -
Sto7g0614 232 MobiDBLite consensus disorder prediction 71 105 - -
Sto7g0614 232 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 42 125 - -
Sto7g0614 232 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 42 - -
Sto7g0614 232 CDD SANT 16 66 IPR001005 -
Sto7g0614 232 SMART sant 13 68 IPR001005 -
Sto7g0614 232 Gene3D - 16 95 - -
Sto7g0614 232 MobiDBLite consensus disorder prediction 66 105 - -
Sto7g0614 232 Pfam Myb-like DNA-binding domain 14 65 IPR001005 -
Sto7g0614 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 42 - -
Sto7g0614 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 42 125 - -
Sto7g0614 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 70 IPR017930 -
Sto7g0614 232 ProSiteProfiles Myb-like domain profile. 9 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0614 Sto-Chr7 4520381 4521438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0614 1 70 MYB Transcription Factor Family AT3G01140 41.379 4.08e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g0614 Myb_DNA-binding 7.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0614 K09422 - gmx:100777107 135.191