Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0613 atggtgAGAAGTCCTTTCTACGACAAAAATGGAGTGAAGAAAGGTGCTTGGAGTAGAGAAGAAGATGACAAACTCAGAGATTATATTCAGAGATATGGTCATAGCAATTGGCGTCAACTCCCCAAATATGCagGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGGTGGATGAACTACCTGCGGCCAAATCTAAAACATGGCAACTTCACCAATGAGGAAGGAGAATTGATCATCCAATTGCACCAGAAACATGGGAACAAATGGTCACTGATTGCTGAAAAGCTACCTGGACGAACAGACAACGATATAAAGAACTATTGGCATAGCCACCTAAAGAAGAGCTTAAAGGGCAATGAGCATAGGGATAGGGATACAGAGTGTGGAAGCAGGGCAagtcatgatgatgatgatggtgatggtgatgatgagtCAGATGATCAATGTCACAATATATTGGAAAGCTCATTGGCATTACCCACTGATATTGCAGAATCAAACATGGAGTGGTCCAGAGATCAAGACCAAAGTAGTAGTACTGTTGTTTCATGGGAATCACTGAGCTTATGCAGCGATGACTTTTGGAGTAGGCCTTTTTTGCTAGAaaatactactactactactacttgtTTTGACCAAACTAGTTTTCCAAGTTTTTGTTTTCCATACCCCTATGAGGGTATTGATAATTTGAGTGACCTACGAGGTATATTTCTTGATTGgtaa 726 0.3719 MVRSPFYDKNGVKKGAWSREEDDKLRDYIQRYGHSNWRQLPKYAGLARCGKSCRLRWMNYLRPNLKHGNFTNEEGELIIQLHQKHGNKWSLIAEKLPGRTDNDIKNYWHSHLKKSLKGNEHRDRDTECGSRASHDDDDGDGDDESDDQCHNILESSLALPTDIAESNMEWSRDQDQSSSTVVSWESLSLCSDDFWSRPFLLENTTTTTTCFDQTSFPSFCFPYPYEGIDNLSDLRGIFLDW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0613 241 CDD SANT 69 112 IPR001005 -
Sto7g0613 241 Gene3D - 7 67 - -
Sto7g0613 241 CDD SANT 16 61 IPR001005 -
Sto7g0613 241 MobiDBLite consensus disorder prediction 118 136 - -
Sto7g0613 241 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sto7g0613 241 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto7g0613 241 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Sto7g0613 241 Gene3D - 68 136 - -
Sto7g0613 241 SMART sant 13 63 IPR001005 -
Sto7g0613 241 SMART sant 66 114 IPR001005 -
Sto7g0613 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto7g0613 241 PANTHER MYB-RELATED PROTEIN MYB4-LIKE ISOFORM X1 1 183 - -
Sto7g0613 241 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto7g0613 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto7g0613 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 183 - -
Sto7g0613 241 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto7g0613 241 MobiDBLite consensus disorder prediction 118 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0613 Sto-Chr7 4507395 4508281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0613 1 204 MYB Transcription Factor Family AT2G31180 46.341 5.47e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto7g0613 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0613 K09422 - gmx:100782270 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0613 7 4507395 4508281 Sto7g0613 7 4507395 4508281 ECH