Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0610 ATGGAGTTTGACCTTGAAAACCCTCTTCACAACTACCATGATGTCTCCTCCCTCTTCTCCACTGAATCTGACCACATCCCTTCCTTCAAACCCACCCACTTCCACATCTCTCTCAGGACCCAACTCATTTCTCTCATCTCCCAGTTGCCCTGTACCTTCGATCCCTTCCTTTCCTACCTAGCTATCAACTATCTTGACCGATTCCTCGCCAACCAACCCACCCTCCAACAGAAGCCATGGACCCTCCAGCTTCTTGCAATTTCTTGCTTATCTCTTGCTGCCAAGATGATGCAAACAGAGTTTTCCCTCACTGATGTCCAGGCCTTTCTGAAACAGGGTGATGGTGGTATGATCTTTGAGACACAAACAATACAGAGAATGGAAGCTCTGATCTTGGGTGCTTTACAATGGAGAATGCGTTCCATCACACCCTTCTCCTTCATTCCATTCTTCATTACACTCTTCGGACTCAATGACCCCCCATTCAGGCAGGTTCTCAAAGACCGAGCTGCTCAGATTATATTCAAATCACAAAGAGAGATGAAGCTTCTGGAATTCAAGCCTTCTATAATTGCTGCTTCCGCGCTTCTCTATGCTTCCCATGAGCTGTTTCCCTTTCAATATCCGTGCTTTCTCGCAGCAATTTCCGATTGTTCATATGAGATAATGTCGCAGTGCTACAATGTGATACATGACATAGCAATGGAAGGGTACGAGTCTGTATTGGATATGGTATCAAGTTCAGACACAGCGGTTAATGTGTTGGACCATCATTTTCTGAGCTCAGAAAGTGAAAGAACCGACGGAATTCCCGCTGCTGCTACtaatactactactactactacactCAAACAAGAGAAGGATAATGTTAAGAGAAGGAAAATCACCAACAACCAAACGGTCACGTTTCTCAGCTTTAACAATTAA 927 0.4391 MEFDLENPLHNYHDVSSLFSTESDHIPSFKPTHFHISLRTQLISLISQLPCTFDPFLSYLAINYLDRFLANQPTLQQKPWTLQLLAISCLSLAAKMMQTEFSLTDVQAFLKQGDGGMIFETQTIQRMEALILGALQWRMRSITPFSFIPFFITLFGLNDPPFRQVLKDRAAQIIFKSQREMKLLEFKPSIIAASALLYASHELFPFQYPCFLAAISDCSYEIMSQCYNVIHDIAMEGYESVLDMVSSSDTAVNVLDHHFLSSESERTDGIPAAATNTTTTTTLKQEKDNVKRRKITNNQTVTFLSFNN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0610 308 CDD CYCLIN 59 132 IPR013763 -
Sto7g0610 308 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 269 - -
Sto7g0610 308 PANTHER CYCLINS 5 269 IPR039361 -
Sto7g0610 308 SUPERFAMILY Cyclin-like 17 139 IPR036915 -
Sto7g0610 308 SUPERFAMILY Cyclin-like 124 241 IPR036915 -
Sto7g0610 308 SMART Cyclin_C_2 142 264 IPR004367 -
Sto7g0610 308 Gene3D - 54 140 - -
Sto7g0610 308 Gene3D - 141 228 - -
Sto7g0610 308 SMART cyclin_7 40 133 IPR013763 -
Sto7g0610 308 SMART cyclin_7 146 232 IPR013763 -
Sto7g0610 308 Pfam Cyclin, C-terminal domain 142 234 IPR004367 -
Sto7g0610 308 Pfam Cyclin, N-terminal domain 16 139 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0610 Sto-Chr7 4500258 4501661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0610 1 285 Core Cell Cycle Gene Families AT4G03270 42.357 5.95e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0610 K18812 - gmx:100799951 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0610 7 4500258 4501661 Sto12g0567 12 3667093 3668496 CCT
Sto7g0610 7 4500258 4501661 Sto7g0610 7 4500258 4501661 ECH