Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0607 atgggAAGAGCACCTTGCTGTGACAAAGATGGACTGAAGAAGGGTCCTTGGACGCCTGAGGAAGATCTCAGGCTCACCAACTATATTCAGACTCATGGACCAGGCAATTGGCGTACCCTCCCTAAGAATGCTGGTCTGCAGAGATGTGGGAAGAGTTGTAGGCTCCGATGGACGAATTACCTGAGACCCGATATCAAGAGAGGAagattttcttttgaagaagaagagacTATTATTCAATTGCACAGTGTCATGGGAAACAAATGGTCGGCTATAGCAGCGAGGCTACCAGGAAGGACTGACAATGAAATAAAGAATTACTGGAACACACACATTAGGAAGAGGCTGCTTCGATCGGGGATTGATCCAGTTACTCACGCGCCGCGCCTTGATCTGCTTGAGATTTCCTCCATTCTAAGCCCATCAATGATGAATCTGCAAGGCTTGTTGGGGGCCCAAGCCCTGATGAATAGCCCACAATTGTTGAAGCTGTTCACTACTCTGTTAGCTCTGAAGAATATTCAAAGCCCGGATCACTTGGTTTCGCAGAATCTACTACAACAAATCCAAGCTGGTGGGAATATTACTGATGAGCCACAAATGCCAATTAATACTACCCAATTTCAGAATATGCCAATTGATCAAAATCAAACTGTCTCAGACAATTCATTTTCTTCCTATCTGTGTGAGAAttttattgataataataataatccccAGCAGGAGCAGAATCAAGTTGATGATTTGCAAGGGAATCTAAGATTTGGGAATAATAATGAGTCAGTTGTGTCAACTCCATTGAATTCATCATCCACCTATGTGAATAGCAGCGCCGAGGAAGACAGAGATAGCCATTGCAGCGACTTTTTCAAGTTTGAATTTCCAGAGAGTCTCGACATTAACGACTTCTtgtaa 915 0.4142 MGRAPCCDKDGLKKGPWTPEEDLRLTNYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHAPRLDLLEISSILSPSMMNLQGLLGAQALMNSPQLLKLFTTLLALKNIQSPDHLVSQNLLQQIQAGGNITDEPQMPINTTQFQNMPIDQNQTVSDNSFSSYLCENFIDNNNNPQQEQNQVDDLQGNLRFGNNNESVVSTPLNSSSTYVNSSAEEDRDSHCSDFFKFEFPESLDINDFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0607 304 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto7g0607 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto7g0607 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 299 - -
Sto7g0607 304 CDD SANT 69 112 IPR001005 -
Sto7g0607 304 Gene3D - 13 66 - -
Sto7g0607 304 CDD SANT 16 61 IPR001005 -
Sto7g0607 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto7g0607 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto7g0607 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto7g0607 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sto7g0607 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto7g0607 304 Gene3D - 69 116 - -
Sto7g0607 304 MobiDBLite consensus disorder prediction 259 277 - -
Sto7g0607 304 SMART sant 13 63 IPR001005 -
Sto7g0607 304 SMART sant 66 114 IPR001005 -
Sto7g0607 304 MobiDBLite consensus disorder prediction 259 279 - -
Sto7g0607 304 PANTHER TRANSCRIPTION FACTOR MYB41 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0607 Sto-Chr7 4468237 4469381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0607 1 304 MYB Transcription Factor Family AT4G21440 49.718 2.13e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto7g0607 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0607 K09422 - gmx:102668351 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0607 7 4468237 4469381 Sto12g0574 12 3689940 3690785 CCT