Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0604 ATGGCTCATCATCATCTCCACCACAACCAGAAAATAAGTATCCTTGAGCAGTATCAAGTTTCAGCACCGCCAGGTTCGGTTCCTTCAACTTCTCTTCCTCTCACTTTCTATGACATTCCTTGGTTTTACAGCCACCACATCCAACGCATCTTCTTCTACCACTTCCCACATCCCACCCACCACTTCCTCCACACACTCCTTCCCACTCTCAAACACTCCCTCTCCCTCACTCTCCAACACTTCTTCCCCTTCGCCGCCAACCTCGTCTTCCCTCCACAACCTCACCTCCACCACCCTTACATTCTCTACAACGAATCCGACTCCATCCCCTTAACTGTCGCTGAATCCACCGCCGACTTCAACCTCCTCGTTTCTCACTCCCCCAAACCCGTCTCAGATCTCCACCCTCTTGTTCCCGCCTTGCCTCCCCCACGCGCCTCACAAAACGGCACGCGTTTTGTTCCTCTCATGGCCGTTCAGCTCACGGTTCTACCAAACTCCGGCTTCTGTATTTGCCTCGCTTTCAACCACGTGGCAGGGGACGGCGCTGCGTTTCACCATTTTATGAAATACTGGGCCTCCGTTTGTAGGGCGAGAGGGGATTTGAATTCCCTCGAACCCTCTCTGCCTCTGCCCTGCCATAGTAGGGAAATTATCGATGACCCAAAAGGGATTAAGCTGATCTACTTGGAGGAATTGAGTGATACGGCGTCGAAATCCATGGAATTCGCAGGCCTCGTCCACGATGACGTGTCTATTGACAAGGTTCGAGCCACTTTTGTGATGAGTcgtgaccaaattgagaaactCAAGAAATTAGTTTCCAATTCCATCAGATGCACCAGTTCGGGGAATTTACACATATCAGCGTTTGTGGTGACATGCTCTTTGATGTGGGTTTGTATGGTGAAGCTAAAATCAGAGGAAACCCAAGGTGGGAATAACAATGTTCCGTGTAAATTGGTGATTCTAGCAGATTGTAGAAACCTTTCTAGTGTTTCAATTCCTTCCACGTACTTCGGGAATTGTTTAGTCACTCGCTTTGTGACACTCGAGAGGGGGCAATTGGTGGGAGAAAATGGGTTGTTTGAAGCGGTGAAGGCTATTGAAAGACAAGTTAGAGATGTAAAGAGTGATGCTTTGAGAGGGGTTGAAACGTTGATGTCAGATTACAGAGAAGTATCCAAATCAGGGGAACCTCTGCTAACAATCGCAGGGTCACCAAAATTGGGTGTGTACGAGACTGATTTTGGGGATGAAGATGGAGGCATTGAAGTTGGGGTGGCCCTTACGAGGACTCAGATGAATGATTTCACTGCCATCTTTAAAGAACAAGTTGGACATATTGAATAG 1353 0.4767 MAHHHLHHNQKISILEQYQVSAPPGSVPSTSLPLTFYDIPWFYSHHIQRIFFYHFPHPTHHFLHTLLPTLKHSLSLTLQHFFPFAANLVFPPQPHLHHPYILYNESDSIPLTVAESTADFNLLVSHSPKPVSDLHPLVPALPPPRASQNGTRFVPLMAVQLTVLPNSGFCICLAFNHVAGDGAAFHHFMKYWASVCRARGDLNSLEPSLPLPCHSREIIDDPKGIKLIYLEELSDTASKSMEFAGLVHDDVSIDKVRATFVMSRDQIEKLKKLVSNSIRCTSSGNLHISAFVVTCSLMWVCMVKLKSEETQGGNNNVPCKLVILADCRNLSSVSIPSTYFGNCLVTRFVTLERGQLVGENGLFEAVKAIERQVRDVKSDALRGVETLMSDYREVSKSGEPLLTIAGSPKLGVYETDFGDEDGGIEVGVALTRTQMNDFTAIFKEQVGHIE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0604 450 Pfam Transferase family 22 418 - -
Sto7g0604 450 Gene3D - 252 448 IPR023213 -
Sto7g0604 450 PANTHER - 419 448 - -
Sto7g0604 450 PANTHER - 13 418 - -
Sto7g0604 450 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 13 418 - -
Sto7g0604 450 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 419 448 - -
Sto7g0604 450 Gene3D - 12 245 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0604 Sto-Chr7 4447090 4448514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0604 11 418 Monolignol Biosynthesis Gene Families AT5G48930 23.690 7.39e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0604 - - gmx:100797294 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0604 7 4447090 4448514 Sto7g0604 7 4447090 4448514 ECH