Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0558 ttgtGCATGCAGGATGAGCACAAGGAAAATTATACGAAGGAAGAAGAGGAATTGCTTGGACAAGCCGAGATATGGAAGTACATGACAGCCTTCACTGACTCCGTGGCTCTGAAAGTAGCCATTGAGCTTCGTGTGGCCGACATCATAGACCAACACGGCCAACCCCTCTCCTTACAGAAGATTCTAGACAACATTGCTGATGCACCCTCCCCTGACATCACCTTTCTCTTCCGAATCATGCGAGTCCTCGTTCGCCGCAAGATCTTCTCTGTTCACCAATCCGAACCCTCGGGAGAAACCCTCTATGGCCTAACCAGAGCCTCCAAATGGATCTTGCGAGACACCAAGATGACTTTGGCTCCCATGCTTCTTCTGGAGAATCATCCCCTGCATTTGAACCCCACACACTACATTAGTGATTGCATCAGAGAGGGGACCAAGAATGGGACCGCGTTTTTCAAGTGTCATGGGCATGAGCAATTTGACTTGACGGGGTTGGATCCTGAGTATAACAAGTTGTTCAATGAAGGGATGGTTTGTACTGCGAGGATTGTATCCAAGGCTGTGGTTGCTGGGTATAAAGATGGGTTCAACAAGATTAATTCTTTGGTGGATGTGGGAGGTGGGATTGGAGGATCATTGTCTGAGATTGTTCGAGCATACCCACATATTAAAGCTATCAACTTTGATTTGCCACACGTGGTTGCTACTGCGCCTAACTACGATGGAATCACCCATGTTGGAGGAGACATGTTTGCCTCCATCCCCTCTGCTGATGCTATCTACATGAAGTGGATCCTGCATGACTGGAGCGACGAGCACTGCATAAATATATTGAAGAATTGCAGGAAGGCAATACCGGAGAAGACAGGGAAGGTGATAATAGTGGACCATGTGCTTCAGCCAGAAGGGAATAATGGAATCTTTGATGAGACAGGATATGCTTTTGATATGATGCTTCTTGCTCACAACGCTGGAGGCAGAGAGAGAACTGAGCAAGACTGGAAGTGGCTCTTTGCTGAAACTGGCTTCCCTCGTTACAACATCATCAGAATCAAAGCTCTTCCTTCCATCATTGAGGCCTTCCCTATCTGA 1095 0.4731 LCMQDEHKENYTKEEEELLGQAEIWKYMTAFTDSVALKVAIELRVADIIDQHGQPLSLQKILDNIADAPSPDITFLFRIMRVLVRRKIFSVHQSEPSGETLYGLTRASKWILRDTKMTLAPMLLLENHPLHLNPTHYISDCIREGTKNGTAFFKCHGHEQFDLTGLDPEYNKLFNEGMVCTARIVSKAVVAGYKDGFNKINSLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPNYDGITHVGGDMFASIPSADAIYMKWILHDWSDEHCINILKNCRKAIPEKTGKVIIVDHVLQPEGNNGIFDETGYAFDMMLLAHNAGGRERTEQDWKWLFAETGFPRYNIIRIKALPSIIEAFPI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0558 364 Pfam O-methyltransferase domain 137 344 IPR001077 GO:0008171
Sto7g0558 364 Gene3D Vaccinia Virus protein VP39 113 364 IPR029063 -
Sto7g0558 364 Gene3D - 6 111 IPR036388 -
Sto7g0558 364 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 13 363 - -
Sto7g0558 364 CDD AdoMet_MTases 203 300 - -
Sto7g0558 364 SUPERFAMILY "Winged helix" DNA-binding domain 14 114 IPR036390 -
Sto7g0558 364 PANTHER O-METHYLTRANSFERASE 13 363 IPR016461 GO:0008168
Sto7g0558 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 361 IPR029063 -
Sto7g0558 364 PIRSF O-mtase 2 364 IPR016461 GO:0008168
Sto7g0558 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 363 IPR016461 GO:0008168
Sto7g0558 364 Pfam Dimerisation domain 36 84 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0558 Sto-Chr7 4179692 4180863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0558 35 350 Monolignol Biosynthesis Gene Families AT5G54160 39.062 6.43e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0558 K22588 - gmx:100800801 606.29