Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0524 ATGGGTTGCATATGCTCCAAGACTACAGCTGTGGAAGACAGCCGAGAAGGTTTGACAACAAAATTGTCATCATCCAACAAAAGGTCATCGGAGTTGAACGTTTCACGACTGAATTCCTCCAAAAGGGATGAGGGAGTTAGGACAAAAAATGTGTTGGATGGTAGTGATGTGAAAGTTGCTTTAATTGGAAAGAAACACACTGGTTCAGTGAAGTTGTTGGATGATCAAATTGGGGAGAACAAAGTTGAGAAACCTGAATTAACTGTTCTCAATCATCCTGGTCTTGGAAAGGTACCAAAGGCTACAGAAGGAGAGCAAGTTGCGGCAGGATGGCCAGCTTGGCTCTCTTCTGTGGCTGGTGAAGCTATTAAGGGATGGATACCACGGAGTGCAAATACTTTCGAGAGGATATGTAAAATTGGCCAAGGAACCTACAGTACTGTTTATAAGGCACGTGACGTGACTCACCAAAAGCTTGTTGCTTTGAAAAGAGTACGCTTTGATAGTCTTGATCCAGAGAGTGTCAAGTTTATGGCAAGGGAAATTTTTGTTCTTCGTGGGCTTGACCATCCAAATATAATAAAGTTGGAGGGCTTGATAACGTCACAAACATCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTACAGGACTTGCAGCACGTCCTGGCATTAAGTTTTCTGAACCACAGATTAAATGCTACATGCAGCAGCTTCTTAGTGGTTTGGATCATTGTCACAGTCGTGGCATCCTCCATCGTGACATAAAAGGCTCAAATCTTCTCATTGATAATAATGGCATCTTAAAGATCGCTGATTTTGGTTTGGCAAGTTTTTTTGATCCTCATCACAGTGTTCCATTGACCAGCCGAGTGGTGACACTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTCATTATGGAGTAGCAGTGGATTTGTGGAGCACTGGTTGTATACTGGGGGAACTATATTCTGGCAGGCCCATATTGCCAGGGAAAACAGAGGTTGAGCAGTTACATAGGATTTTTAAGCTTTGTGGCTCACCATCAGAAGATTACTGGCTTAAATTAAGGTTGCCACACTCAACAGTATTCAAGCCTCCACACCATTATAGACGTTGTGTTGTTGAAACATTCAAGGAATATCCATCTGCTGCTGTCAGGCTTATAGAGACCCTACTTTCCATAGATCCTGCACATCGTGGAACAGCAGCTACTGCTATAAAAAGTGAGTTCTTTACTACGGAACCCCTTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCTAAATTGCGAGATGAAGCAACCAGAAGGCAAGGAGCTGTTGGAGGAAGGGAGCAGAAAGTTGGCGTGGGAGTTAGACCCGAGAAAGAACTTCAGGCACTTGCAGGAAATAACAATGCTGACCCACGAATATCAATGCAGCAAGGACGTCATTCCAGCTCAAAGAGCCGAAGTGAATTGTTCAATCCTCCGAGAGAATCTGCATCTGGGTTGTTGGTTTTTCCCCATAAACAGTCAGAAGATGTTAAAGAAGTGGAAAATAATTTCTCTGGGCATTTTTATAGGAGGCCTTCACATTCAGGCCCACTGGTTCAGGGCTCTGGCTGGGCAAAGGTTGGAAAGGACGTAGATGAGCAGCATCTTGGTTCAAACCGCCTCAACCTATCAAAACTATCTGGCTTAGTTGCATCTAGGACTTTAGTGTCTAAAGATCATGAGGAAAAGTCACTTCCTTCACAGCCTGGAAAAACCATTGATGTACGAAAATCTGTGGAGTCAATGAATGGATTAGAGTCCAGGAGAAGGAAGGATCAGAAACGCCGGTCTCCGAGATCTGTTAATCAGTGTCTTATAGAAAATGCAAGGATCCCCACTAAAGAAATGACTCAGGAAGGGAGATCCAGGGGAAACAAGATATATCTCTCTGGTCCATTATTGATTCCTTCAAACAACATGGATCAAATGCTTAAAGAGCATGATCAAAAGATCCAAGAATATTCAAGACGAGCTAGAATGGACAAGTCAAGAGGCGAGAAAGTTGGTGCAAAGCCAAAGTAA 2097 0.4316 MGCICSKTTAVEDSREGLTTKLSSSNKRSSELNVSRLNSSKRDEGVRTKNVLDGSDVKVALIGKKHTGSVKLLDDQIGENKVEKPELTVLNHPGLGKVPKATEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERICKIGQGTYSTVYKARDVTHQKLVALKRVRFDSLDPESVKFMAREIFVLRGLDHPNIIKLEGLITSQTSRSLYLVFEYMEHDLTGLAARPGIKFSEPQIKCYMQQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPHSTVFKPPHHYRRCVVETFKEYPSAAVRLIETLLSIDPAHRGTAATAIKSEFFTTEPLACDPSSLPKYPPSKEIDAKLRDEATRRQGAVGGREQKVGVGVRPEKELQALAGNNNADPRISMQQGRHSSSKSRSELFNPPRESASGLLVFPHKQSEDVKEVENNFSGHFYRRPSHSGPLVQGSGWAKVGKDVDEQHLGSNRLNLSKLSGLVASRTLVSKDHEEKSLPSQPGKTIDVRKSVESMNGLESRRRKDQKRRSPRSVNQCLIENARIPTKEMTQEGRSRGNKIYLSGPLLIPSNNMDQMLKEHDQKIQEYSRRARMDKSRGEKVGAKPK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0524 698 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Sto7g0524 698 MobiDBLite consensus disorder prediction 668 698 - -
Sto7g0524 698 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0524 698 CDD STKc_CDK9_like 134 418 - -
Sto7g0524 698 MobiDBLite consensus disorder prediction 16 46 - -
Sto7g0524 698 Coils Coil 662 682 - -
Sto7g0524 698 MobiDBLite consensus disorder prediction 16 36 - -
Sto7g0524 698 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0524 698 PANTHER CELL DIVISION PROTEIN KINASE 3 686 - -
Sto7g0524 698 MobiDBLite consensus disorder prediction 582 698 - -
Sto7g0524 698 Gene3D Phosphorylase Kinase; domain 1 128 221 - -
Sto7g0524 698 Gene3D Transferase(Phosphotransferase) domain 1 222 455 - -
Sto7g0524 698 PANTHER CYCLIN-DEPENDENT KINASE 3 686 - -
Sto7g0524 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Sto7g0524 698 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0524 698 MobiDBLite consensus disorder prediction 473 507 - -
Sto7g0524 698 MobiDBLite consensus disorder prediction 478 503 - -
Sto7g0524 698 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0524 Sto-Chr7 3925864 3930611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0524 126 461 Core Cell Cycle Gene Families AT5G10270 48.580 2.50e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto7g0524 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0524 - - gmx:100807590 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0524 7 3925864 3930611 Sto12g0643 12 4066999 4072622 CCT
Sto7g0524 7 3925864 3930611 Sto7g0524 7 3925864 3930611 ECH