Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0521 ATGGATCCGAATCCGATCAACCCAATTAGTCatttagcttcttcttcttcttccaccaaGATTGAAAGAAGGATAGTTGAGAAAAACAGAAGAAATCAGATGAAGATCCTCTACTCCAAACTCACCTCTCTTCTCCCAAACTTCAACTCCaagGAAATGATGGGATTGCCAGATCAGATAGACGAGGCAATAAAGTACATAAAGAGCTTAGAGGCAAAGGTGAAGATGGGTGAGGAGAAGAGAGATGGGTTGGTGGGAAAGAAAAGGTCTAATAATAACTATTGCGGCTCCAGTAGTAGTGCTggttgtaattattttgggagttATGGTAACGAAACCCTGAAATCGCCACAAATAGAGATTCATGAGATGGGTTCGTCGCTACAAGTTGTTCTCATAAGTGGTTTGGATAATCAGTTCATTTTCTATGAGATTATTCGTATTCTTCATGAAGAGAACGTAGAGATTGTAAGTGCTAATTCCTCACTCGCCGCGGATCATTCAATGCATCACATTGTGCATGCAAAGATTGAGGCAGGGTTGTTTGAGTTCGGAGCAACGAAAGTGAGTGAGAGATTGAAAAAGTTTGTAGTAACAATGAAACTTCGGTTAGCATATTATGATTTCAGTTGGAGATTTACCTCAATAGGAGATCCATGTGAGCTAGCTATAATGTTAGCCCCAAGAGATAATCTCAAAAAGCACCTGTCCATAGCTGAATACATCAACTTTTGCAGTGATAGCTTCGCCAGAAAACCATTCTGGTGCGAGATAGCCTCTGGTCCCTCTGAAGGTGTGCTAAATCCACCCTCCCCAAGTTTCTGTGTAAAATTTTTTGTGGCCCTTTGCAAGTCTCGGTACTTGAACTGCATCAGCGTATGGCTCACTGCTTCAGATGAACCACCAAACACTTTTTTCCTCATAAATCTCAGAAGAATACCAATGGCAGCCAGAAGAACTAGTACAGCTACTACTACAACCACAACCACAATGAAAGTAGCCCTCTTTTCTCCACTCTCTTTGGCGCTAGATGTTGTGTCTCGAACATAA 1050 0.3981 MDPNPINPISHLASSSSSTKIERRIVEKNRRNQMKILYSKLTSLLPNFNSKEMMGLPDQIDEAIKYIKSLEAKVKMGEEKRDGLVGKKRSNNNYCGSSSSAGCNYFGSYGNETLKSPQIEIHEMGSSLQVVLISGLDNQFIFYEIIRILHEENVEIVSANSSLAADHSMHHIVHAKIEAGLFEFGATKVSERLKKFVVTMKLRLAYYDFSWRFTSIGDPCELAIMLAPRDNLKKHLSIAEYINFCSDSFARKPFWCEIASGPSEGVLNPPSPSFCVKFFVALCKSRYLNCISVWLTASDEPPNTFFLINLRRIPMAARRTSTATTTTTTTMKVALFSPLSLALDVVSRT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0521 349 Pfam Helix-loop-helix DNA-binding domain 22 71 IPR011598 GO:0046983
Sto7g0521 349 MobiDBLite consensus disorder prediction 1 21 - -
Sto7g0521 349 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 14 204 - -
Sto7g0521 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 86 IPR036638 GO:0046983
Sto7g0521 349 Gene3D - 11 96 IPR036638 GO:0046983
Sto7g0521 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
Sto7g0521 349 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 14 204 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0521 Sto-Chr7 3874736 3880053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0521 13 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.503 2.32e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto7g0521 HLH 0.0002 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0521 - - gmx:100817883 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0521 7 3874736 3880053 Sto7g0521 7 3874736 3880053 ECH