Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0512 atggTATGCTTGGGATTTGATATGGGAGCCGCTCAAATTTGGTTGTTTAAGAGGAGGAGATTAGGGTTTGTATTCCAGATTGTGTATGGATGTTGGGTTGTTCAACAGTTCCTTCGTCCTGTGGCGGGTCTGAGACCGTTAAGAGAGAGAACGAGGTCATGGGGCGATGAGTGGCTATTTACACGGAAAGACGAAAATGATCAGTTTTCACAATGGAACATAACAGGGACTTACAGAGGGACGTGGAAATTTTTAGAAACAGCGAATGGCACTTCCAGATTTTCAGACATCAGAAAAACAAATGGCAATtcagttattgaattatttagtaCACCCACAAAAATAACTGGTGTGCATTATGTTCAGGGGGTAATTATATTCCATGATGTATTTGACAACGAATACAATGTTGGCGGTGCTCAAATCAGAGTAGAAGGTGTATATATATGGCCCTTTAAACAGCTTCGAATGGTAGCTAACAGTGGAAAAGAGGGAGAGTTGAATCAGGACGAAGATTATATCTTATCTAATCCATATCATCTGCTTGGAGTGTTCTCATCTCAGGTATTCCAAGAATCATCAAGAGATAAGATGTGGAGAAGAAAAcattCTCCAATATATGACATGGAGAAGCATTGTAATATAGAAATTGCCGCACAGATTTCACACCTGTCATCATCAAAGAATGATGGGGATCATGATCGGTTCCACCTAGAAGGGTTAATGGAGAGTCCCTCAGTGGATGATGATGGGGACTGCTTCTCACCTTTAATGTTGAATGCTACTTCTGTTAATATTGAGGTCTACTATAACAAAGCAGTGAACTACACCTTGATGGTTACCTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAAATGGAGCATAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAATATTAATGATTGGCCAGCAGGCTATAATGGATGCTTATCTTTGCCTTTTACACCTGACTGCCGGAATACTAGTTGAATCTTTGTTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTCGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATATGGAAGGCAAGTAGACCTTTGAGTAATGGAGAAGGCTGGGAGACAATGAGGCGTGAACTTTCAGTTTTATACAGTCGGTTCTATGGGATCCTATTGGGAGGAATTCTGCTCATGTATGAATTCCATAATTATTTGAGACCTATTCTTCTTCTTATGTACTCATTTTGGATACCTCAGATAGTCACCAATGTTATTCGTGATTCACGCAAACCATTGCATCCTCATTATATCTTAGGGATAACTGTCACTCGGTTAGCAatcccattatatatatttggttgcCCAAACAACTTCATGCGCATTGAACCAGACAAGAGCTGGTGTGTGTGTTTAGCTGTATTTATTGGACTTCAGGCTGTGATTCTTCTACTTCAGCACTATCTTGGGTCCCGCTGGTTCATTCCTCGTCAGATTCTACCTGAGAAATACAGCTATTACAGGAGGTTTggtcaaaatacaaatcatggTACAGACTGTGTTATTTGCATGACAGCTATTGATCTTAATCAACGATCGAGTGATTGCATGGTGACACCTTGTGAGCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGTCCAACTTGCAGACGCCCATTGCCACCTGCTTAG 1716 0.3922 MVCLGFDMGAAQIWLFKRRRLGFVFQIVYGCWVVQQFLRPVAGLRPLRERTRSWGDEWLFTRKDENDQFSQWNITGTYRGTWKFLETANGTSRFSDIRKTNGNSVIELFSTPTKITGVHYVQGVIIFHDVFDNEYNVGGAQIRVEGVYIWPFKQLRMVANSGKEGELNQDEDYILSNPYHLLGVFSSQVFQESSRDKMWRRKHSPIYDMEKHCNIEIAAQISHLSSSKNDGDHDRFHLEGLMESPSVDDDGDCFSPLMLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHNYLRPILLLMYSFWIPQIVTNVIRDSRKPLHPHYILGITVTRLAIPLYIFGCPNNFMRIEPDKSWCVCLAVFIGLQAVILLLQHYLGSRWFIPRQILPEKYSYYRRFGQNTNHGTDCVICMTAIDLNQRSSDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRPLPPA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0512 571 SMART ring_2 521 564 IPR001841 -
Sto7g0512 571 SMART ringv_2 520 565 IPR011016 GO:0008270
Sto7g0512 571 PANTHER RING ZINC FINGER PROTEIN 15 571 - -
Sto7g0512 571 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 15 571 - -
Sto7g0512 571 Pfam Ring finger domain 520 565 IPR001841 -
Sto7g0512 571 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 508 571 IPR013083 -
Sto7g0512 571 SUPERFAMILY RING/U-box 507 570 - -
Sto7g0512 571 ProSiteProfiles Zinc finger RING-type profile. 521 565 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0512 Sto-Chr7 3779022 3788170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0512 516 571 C3H Transcription Factor Family AT2G35420 37.500 2.99e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0512 K23788 - qsu:112035018 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0512 7 3779022 3788170 Sto7g0512 7 3779022 3788170 ECH