Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0505 ATGAGCAGCGTCTGTGCTGATCAGCATAAGttccttccattttcttctccCAAGAAATCTCTCATGAGAGACATTGATATCCCTCCCAGGAAGCTCCTCACTCGCCGGTCCTCCGCCGCCGATATGTACTCCGACTCGCCGCGTTTCACCTCTGCCGAGGAGGCCTTCCTGCAGAAATTCCTTCCACATAATATGGACTCCGATGAGGACGACGGCGACGATGAGGACTCTGATCCCTACTCCTCCGATCATTTCCGGATGTATGAGTTTAAGGTCCGGCGGTGCACGCGGAGCCGTAGTCATGACTGGACGGACTGCCCCTTCGCTCACCCCGGGGAGAAGGCCCGCCGGCGTGACCCGCGGCGGTACCACTACTCCGGCACGGTGTGCCCGGAGTATCGGCGCGGCGCGTGCAGCCGAGGAGATAGCTGCGAGTTCGCTCACGGCGTGTTTGAGTGTTGGCTTCACCCTGCGAGGTACCGAACAGAGGCTTGTAAGGATGGGAAGAATTGTAAGCGGAAGGTTTGCTTCTTCGCTCACACTCCTCGCCAGCTCAGGATTTTGCCTCTCAATACcactaattcttcttcttccgcggatcatcatcatcatagtcTCGTTTCCTGCAAGACCACCGCCGCCGCCAACAAATTCTTGAATAATCCCGCATCTCCGGGATCCAATAATACCACTAATTGCTGTTTGTTTTGCCACCATTGCGTTTCGTCTCCGACCTCCACGCTATTCGGGATGTCGCACATGTCCCCGCCGCTCTCGCCGTCGTCGTCCGCTGTTTCGCCGCCTCTGTCTCCGGTGAAACGCCGGTCGCCGATTTCTCGGTATTGTGATAGATTTTCAGGATTAAGTGAGACCACATCGTCGTCTAGTGCGTTGATGAGCTACAAAGATGTGCTGAATGAGTTGATGAGCTCCTTGGAGGGTCTTAATTTCATTGAAGCTGCTAATTCTTCTTCCCCTGTTGTCTCTGCTGCAAAACCCCCAAATCTGCCTTGGCTTGATGTTTCTTTGATTAACTCTGAAGATCATCATCCTAATCAGCAGTTCATTGTTTCACCCACTTCTTCTAATTTCAACTGTgaagatcatcatcatcagcagCAGCAGCATAATAATTATCATAATCAGCAGCAGTACATGAATTCCCCAAATGCCTCCTCTGCTTCTGGAAGCTGCTTCTCCAATAATGGTAAATTGTTGTATAATAATTCAAGCAGCGCCAGCAATAATAATATCTACAGCAATATTGAAAGCAAGGTGGTTAGTAGTGATAATGGATTATCCTGCTCAGCCCCAGATCTGGGCTGGGTGAATGAGCTGCTGATGAACGATGTGTACGAGACATTATTTGCTTATAACGTGGATATGGTGATGCGGGGACCTTCCATGTACTAG 1413 0.482 MSSVCADQHKFLPFSSPKKSLMRDIDIPPRKLLTRRSSAADMYSDSPRFTSAEEAFLQKFLPHNMDSDEDDGDDEDSDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSGTVCPEYRRGACSRGDSCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHTPRQLRILPLNTTNSSSSADHHHHSLVSCKTTAAANKFLNNPASPGSNNTTNCCLFCHHCVSSPTSTLFGMSHMSPPLSPSSSAVSPPLSPVKRRSPISRYCDRFSGLSETTSSSSALMSYKDVLNELMSSLEGLNFIEAANSSSPVVSAAKPPNLPWLDVSLINSEDHHPNQQFIVSPTSSNFNCEDHHHQQQQHNNYHNQQQYMNSPNASSASGSCFSNNGKLLYNNSSSASNNNIYSNIESKVVSSDNGLSCSAPDLGWVNELLMNDVYETLFAYNVDMVMRGPSMY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0505 470 PANTHER UNKEMPT FAMILY MEMBER 24 447 IPR045234 -
Sto7g0505 470 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 24 447 - -
Sto7g0505 470 SMART c3hfinal6 159 182 IPR000571 GO:0046872
Sto7g0505 470 SMART c3hfinal6 124 150 IPR000571 GO:0046872
Sto7g0505 470 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 129 149 IPR000571 GO:0046872
Sto7g0505 470 ProSiteProfiles Zinc finger C3H1-type profile. 125 151 IPR000571 GO:0046872
Sto7g0505 470 MobiDBLite consensus disorder prediction 19 46 - -
Sto7g0505 470 SUPERFAMILY CCCH zinc finger 123 153 IPR036855 GO:0046872
Sto7g0505 470 Gene3D - 120 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0505 Sto-Chr7 3726887 3730888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0505 76 186 C2H2 Transcription Factor Family AT5G07500 70.270 1.58e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto7g0505 zf-CCCH 3.8e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0505 K23047 - zju:107409388 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0505 7 3726887 3730888 Sto7g0505 7 3726887 3730888 ECH