Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0500 ATGGAGACGTTCTCGACGGAGGAATCTCATCATCATAACGAATTCGCTGAACTCTCCGATGCGAGTTTATTGGACTCCATCAATTTTGACGATATCTTCGTCGGTATTCACGTCGACGGCGATGTCTTGCCCGATTTGGAAATGGACCCCGAAATCCTCGCCGATTTCTCCGTCTCACTCGATCAATACTCTCCTCCCGATCATATCACCACCGCCGCCAacaaagaggaggaggaagataaAATCTCTTCCGGCTTGAATTCCGAGTCAAGCCGGAGCGAGGAGATAGCGAGCAAAAGAGAGGATAAGGCGTCGCAAAAGGAAAGGAAGTCATCGGCTCATCAATCCAAGAATAATAATTGTCAAGGCAAGAGGAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAATTAGGAGTAGATAAGGCGGTGCCTTCGAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCAAGCCATCTTCAAAAATATCGATCCCATAGGAAACATCTGCTAGCACGTGAAGCCGAAGCAGCGAAGTGGAGTAAAAGAAGACAAACATCGTATGGAATGAAGAGTAGGTCAGAAGCGAGCCCTTGGGTAGGCGTAGGCGGGATAGCACCAACCATGGGTTTCCCTCCCATGAGTCCACCGCCGATGCAGCATTTCAGAGCCTTACACGTGTGGGGCCATCCCACCATGGACCACTCCTTCATCCCCTTATGGCCCAAGCATCTCCCGCCCCATTCCTCCTCGCCTTCGCCGCTAGCTTGGGCCGCGCCGCCTCCAACACCAACTCCTGACCCTTCTTCATATTGGCATCCTCCTCAACGGGCTCCAAATGCACTAACGCCAGGAACACCTTGTTTTCCACCACCTCTGACACCTACAACGAGATTTCCCTCTCCACCTGTCCCCGGTATCCCACCACCTCATGCCTTGTACAAAGTAGATCCCGGCATCGGCGTCCCCACCGCTCAACCCGGCCCCCGTCCTCTCCTCGACTTTCATCCGTCAAAGGAGAGCATAGATGCAGCCATTGGAGATGTTTTATCAAAGCCATGGCTGCCATTGCCTCTTGGGCTTAAAGCTCCAGCGCTTGATAGTGTGATGGGTGAATTACAGAGACAAGGAATTCCCAAAGTTCCACCTTCTTGTGCTTGA 1203 0.5087 METFSTEESHHHNEFAELSDASLLDSINFDDIFVGIHVDGDVLPDLEMDPEILADFSVSLDQYSPPDHITTAANKEEEEDKISSGLNSESSRSEEIASKREDKASQKERKSSAHQSKNNNCQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAAKWSKRRQTSYGMKSRSEASPWVGVGGIAPTMGFPPMSPPPMQHFRALHVWGHPTMDHSFIPLWPKHLPPHSSSPSPLAWAAPPPTPTPDPSSYWHPPQRAPNALTPGTPCFPPPLTPTTRFPSPPVPGIPPPHALYKVDPGIGVPTAQPGPRPLLDFHPSKESIDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKVPPSCA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0500 400 Pfam Myb-like DNA-binding domain 129 178 IPR001005 -
Sto7g0500 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 182 IPR017930 -
Sto7g0500 400 PANTHER TRANSCRIPTION ACTIVATOR GLK1 8 399 - -
Sto7g0500 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 126 180 IPR006447 GO:0003677
Sto7g0500 400 MobiDBLite consensus disorder prediction 71 85 - -
Sto7g0500 400 SUPERFAMILY Homeodomain-like 124 183 IPR009057 -
Sto7g0500 400 MobiDBLite consensus disorder prediction 64 125 - -
Sto7g0500 400 Gene3D - 123 184 - -
Sto7g0500 400 MobiDBLite consensus disorder prediction 263 286 - -
Sto7g0500 400 MobiDBLite consensus disorder prediction 93 114 - -
Sto7g0500 400 PANTHER TRANSCRIPTION ACTIVATOR GLK1 8 399 IPR044825 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0500 Sto-Chr7 3682196 3685143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0500 38 400 G2-like Transcription Factor Family AT2G20570 42.132 6.36e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto7g0500 Myb_DNA-binding 5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0500 - - gmx:100775671 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0500 7 3682196 3685143 Sto7g0500 7 3682196 3685143 ECH