Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0498 ATGTCCTTCATGCGGCCATCATATCAAATGCCAAGACCAGATCAAGAGATTTTAGAACATTTGGAAGCGAAATTAGGATCTGATATTCATAAGCTTCATCCATTAATCGATGAGTTCATCCCTACTCTTGAAGGCCAGAATGGAATCTGCTATACTCACCCCGAGAAGTTGCCAGGAGTAAGGAAAGATGGGGTGGTGCGTCATTTCTTTCACAGGCCATCGAAAGCATACACGACAGGAAcaaggaagaggaggaaggtTCAGACGGAGGAAGAGGACGGAAGCGAGACACGTTGGCACAAAACCGGCAAGACCCGAGGTGTGTACACGAGTGGCAACCTCGTAGGCTACAAGAAGATTCTGGTTCTCTACACCAACTATGGGAAGCACCGGAAGCCCGAGAAGACGAGCTGGGTCATGCATCAGTACCACCTCGGCTTCAACGAAGAGGAGAAGGAAGGCGAGTTGGTGCTCTCTAAGGTTttctaccaaacacaacctagGCATTGTGCTGCTGCCTCTACTATGCTTCTCAAACATCATAATCATCCACCTGCACCTAATCATGGGGGCTTCCTTCAGTtctacaataacaataatagtaataattccTCTAATTTCTTGTCCTTTGACCATCATCCACCTCAAGCTGCACGATCTCCCACTCATCCTCATCATGTCGTTTCCTCGCATTTTCCTGTCGTCCAGGATGCTTCTTCCTTCATTCCTTGA 732 0.4385 MSFMRPSYQMPRPDQEILEHLEAKLGSDIHKLHPLIDEFIPTLEGQNGICYTHPEKLPGVRKDGVVRHFFHRPSKAYTTGTRKRRKVQTEEEDGSETRWHKTGKTRGVYTSGNLVGYKKILVLYTNYGKHRKPEKTSWVMHQYHLGFNEEEKEGELVLSKVFYQTQPRHCAAASTMLLKHHNHPPAPNHGGFLQFYNNNNSNNSSNFLSFDHHPPQAARSPTHPHHVVSSHFPVVQDASSFIP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0498 243 Gene3D NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Sto7g0498 243 SUPERFAMILY NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Sto7g0498 243 MobiDBLite consensus disorder prediction 77 96 - -
Sto7g0498 243 Pfam No apical meristem (NAM) protein 14 145 IPR003441 GO:0003677|GO:0006355
Sto7g0498 243 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Sto7g0498 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 14 175 IPR044799 GO:0003700
Sto7g0498 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 14 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0498 Sto-Chr7 3662081 3663947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0498 14 175 NAC Transcription Factor Family AT4G28500 77.108 2.83e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0498 NAM 7.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0498 - - gmx:100795895 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0498 7 3662081 3663947 Sto7g0498 7 3662081 3663947 ECH