Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0480 ATGGGGATGAAGAGCACAGGAGGAGAGATAGTTCAAGTCCAAGGAGGCCACATTGTTCGATCCACAGGTCGAAAAGATCGTCACTCTAAGGTTTACACTTCCAAAGGCCCTCGAGATCGCAGGGTTCGTCTCTCTGCCCACACAGCCATTCAATTCTACGACGTTCAAGACCGTCTTGGCTATGACCGACCCAGCAAAGCCGTGGATTGGCTCATCAAGAAGGCCAAATCCGCCATTGATAAGCTCGCCGAGCTTCCTCCATGGCACCCCACTCCCAACAACACTACCACAACCGAAGAAGCCCCTGAAATTGTTGGAATTCCGGAGGAAACAGAGTCCTCTGGCTACAATTTTCAGTTCGTTGAAAACCATTCTGGTTTTGTTCCTTCGCAGATTGATACTGACGCTATAGCTTTCTTCCCCACCACTTCTGCGACCGCGTCCATGAATTTTCCGACATACCCACCTGCTATAATCTCCAGAACCGCCAACCCCAGTGAAGATCTTGGGCTTTCTCTTCATTCTTTTCAAGATTCGGGTTTAATCCATGGGCAGTCATCACAAGGAGACGCGAATCATCCTGTAGGGTTTGTGAGTTGGAATAATAGTGATGCGTCTATGTTGGTTGGTCAAGagcATCATCAGAACAAATCCTCCCAAGCTTCCATCTTTGGGGGTAGGTTCGTGTCTGATGGAATGGGGATTCATGGGTTTTGCATTCCCGCGAGGATTCAAGGCGACGATGAAAACAACCATCATCATCATGGGATTGTTGCTTCTGTTCATAGGCCTTCTTCCTCTGCTTCTCCCAATTCTCACCACTGA 825 0.4848 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWHPTPNNTTTTEEAPEIVGIPEETESSGYNFQFVENHSGFVPSQIDTDAIAFFPTTSATASMNFPTYPPAIISRTANPSEDLGLSLHSFQDSGLIHGQSSQGDANHPVGFVSWNNSDASMLVGQEHHQNKSSQASIFGGRFVSDGMGIHGFCIPARIQGDDENNHHHHGIVASVHRPSSSASPNSHH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0480 274 PANTHER TRANSCRIPTION FACTOR TCP4 199 274 - -
Sto7g0480 274 PANTHER TRANSCRIPTION FACTOR TCP4 2 193 - -
Sto7g0480 274 Pfam TCP family transcription factor 23 98 IPR017887 -
Sto7g0480 274 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Sto7g0480 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 193 IPR005333 GO:0003700
Sto7g0480 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 199 274 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0480 Sto-Chr7 3542715 3543626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0480 8 178 TCP Transcription Factor Family AT3G15030 52.657 5.05e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto7g0480 TCP 3.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0480 - - gmx:100814907 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0480 7 3542715 3543626 Sto7g0200 7 1470155 1471468 ECH
Sto7g0480 7 3542715 3543626 Sto4g2806 4 28911671 28912807 ECH
Sto7g0480 7 3542715 3543626 Sto7g0480 7 3542715 3543626 ECH