Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0454 atgggTGAGAGCATATTATACATATCTGACGGGGAAAACAAGAGTGGTAGTAGTGAAGCTGAAGGCACAGATTTTGAAGTGAAGAAAGGCAGGAAACGTTCGTTCTTGGACTTGAACGAAGAAGCTTGCGTGGATGTGGAATATTACGACGATGAGACCGAGactgagaatgagaatgagaatgagagagAAGGTAATTTGAGTAGTAGTAACAATTCGAGCACGGATCATAAAGAAGAAGGAGGCAAAGAAAGAAGCACAAGTACTACTACTGTAAGGCAATATGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCCGATCTCCATCTTTCTTTTGTGCTTGCTGTTGAGAGGCTTGGTGGCCAGGAAAGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTGAGAGGACTTAGTATTGCACATGTGAAGAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAagTTTTATCTCACAGTCACAGTAGAGGAATGCAAGGAAGAGATGGCGTTGTGGAGATGTACGAAAGATATAGTAAAGCCCAAGGACACTTTGGGATTCATAACAGAAACTATCTACCATTAATCAAACATCCTTATAATGACTTCAAACCTCAAAGCTCTTCAAGGTATGATCCAAGTGGGATAGTGATGAATAGCCAGTTGATGAGAAGATCAAGTTCAGAGTGGAGCAATATGGAGAGGTCAGAAGAGTCACATCCTTCTTCACACCTATTTGATGTAAGGGCTGCAATAACAAGATCAAGTGGGCCGCTTAGGTTTAGCCAATTTCCTCGTGAAATAATGGTGGGAGTTGGATCACAAGCCAGTGATAGAGCAAGAAGCATTTCTTGGGATGGaaagtataatattaataataataataatattgccgAACCAAATTCACTATGGAGAACCAAAGCTACCTCTATCCATCATCACTCTCAACCTACTTCTCGTGCTCAAATCTTCTCATCATCAACCCTTGCGCAGTTTGATGCTAATAAGGTTCATGCTATGAAAGATGGAATGCTCCGATTTACAAATCATGATGAAGAACATCATGATGATAATTATAAAGGGCAATATTCAGAGAGgttgaagaaggaggaggagaagaaaggTTCAGGAAGTGGGAGTTTGTTAGAGCTAAGTTTAAGCCAAGATTTTGGAAGCATTAAAGATCAGATgaagtcatcatcatcatcaggtcCAGAAAGTAGTGATCATCATCATTTTGATAAGCAACAACAAGTTAATACCAtgctttctctttctttgttcCCAAGTTAA 1314 0.3661 MGESILYISDGENKSGSSEAEGTDFEVKKGRKRSFLDLNEEACVDVEYYDDETETENENENEREGNLSSSNNSSTDHKEEGGKERSTSTTTVRQYVRSKMPRLRWTPDLHLSFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSHSHSRGMQGRDGVVEMYERYSKAQGHFGIHNRNYLPLIKHPYNDFKPQSSSRYDPSGIVMNSQLMRRSSSEWSNMERSEESHPSSHLFDVRAAITRSSGPLRFSQFPREIMVGVGSQASDRARSISWDGKYNINNNNNIAEPNSLWRTKATSIHHHSQPTSRAQIFSSSTLAQFDANKVHAMKDGMLRFTNHDEEHHDDNYKGQYSERLKKEEEKKGSGSGSLLELSLSQDFGSIKDQMKSSSSSGPESSDHHHFDKQQQVNTMLSLSLFPS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0454 437 Pfam Myb-like DNA-binding domain 103 153 IPR001005 -
Sto7g0454 437 MobiDBLite consensus disorder prediction 46 93 - -
Sto7g0454 437 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 49 424 IPR044848 GO:0003700
Sto7g0454 437 MobiDBLite consensus disorder prediction 17 31 - -
Sto7g0454 437 MobiDBLite consensus disorder prediction 1 31 - -
Sto7g0454 437 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 49 424 - -
Sto7g0454 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 157 IPR017930 -
Sto7g0454 437 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 156 IPR006447 GO:0003677
Sto7g0454 437 MobiDBLite consensus disorder prediction 399 437 - -
Sto7g0454 437 Gene3D - 100 157 - -
Sto7g0454 437 SUPERFAMILY Homeodomain-like 99 155 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0454 Sto-Chr7 3309747 3312496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0454 89 160 G2-like Transcription Factor Family AT2G42660 80.556 5.46e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto7g0454 Myb_DNA-binding 4.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0454 - - lang:109337615 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0454 7 3309747 3312496 Sto7g0454 7 3309747 3312496 ECH