Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0452 ATGTTGATAATTGTTATACTATTTGTTGCAGATAATGCTGGAACAAATCAAGCTGCTTCTAGTGGAACTTCATTGAACACTAAGAGACTGGATGAAGATACAGAGAATCTTGCTCATGAACGTGTGCCAACTGAACTCAAGAAAGCAATCATGCAAGCTCGGATGGATAAGAAACTTACCCAGGCTCAGCTTGCTCAAATCATCAATGAGAAACCTCAAGTGATCCAGGAGTACGAGTCAGGGAAAGCCATTCCAAACCAGCAGATAATTGGCAAGCTGGAGAGGGCCCTTGGAGCCAAACTGCGTGGCAAGAAATAG 318 0.434 MLIIVILFVADNAGTNQAASSGTSLNTKRLDEDTENLAHERVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0452 105 Gene3D - 34 105 IPR010982 GO:0003677
Sto7g0452 105 Pfam Multiprotein bridging factor 1 12 42 IPR013729 -
Sto7g0452 105 SUPERFAMILY lambda repressor-like DNA-binding domains 44 101 IPR010982 GO:0003677
Sto7g0452 105 Pfam Helix-turn-helix 50 100 IPR001387 -
Sto7g0452 105 SMART mbf_short4 49 104 IPR001387 -
Sto7g0452 105 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 105 - -
Sto7g0452 105 ProSiteProfiles Cro/C1-type HTH domain profile. 50 104 IPR001387 -
Sto7g0452 105 CDD HTH_XRE 48 98 IPR001387 -
Sto7g0452 105 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 11 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0452 Sto-Chr7 3288984 3290196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Sto7g0452 HTH_3 2.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0452 K03627 - gmx:100500420 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0452 7 3288984 3290196 Sto7g0452 7 3288984 3290196 ECH