Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0440 ATGATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCAGGGAACTTCCCAGCCTTGGGTAAGGATTTTAAAGAAAAGAAGCGGCTGCCAAGGGTTATGAGTGTCCCGGGGATAATCTCAGAACTTGATGATGATCAGGCACATAGTGTTTCTTCTGATAATCCATCAACTATTTCGACAGATCGTATGATAATTGTAGCAAACCAACTTCCTTTGAAAGCAACGCGAAAGGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAAGATTCTTTACTTTTACAGCTTAAGGATGGATTTCCTGAAGATATGGAGGTTCTCTATGTTGGGTCATTGAGGGTTGATATTGATCCAGCTGAACAGGATGATGTTTCACAGTATTTATTGGATAAATTCAAATGTGTCCCTACTTTTCTGACCGCTGATGTTTTGAGTAAATTTTATGATGGCTTCTGCAAAGGGCAGTTATGGCCACTGTTTCATTACATGTTACCATTTTCAACTGATAAAAGCCACCGTTTTGATCGCTCTTTATGGGAAGCCTATGTGATGGCTAATAAGATATTTTTTCAGAAGGTAGTTGAGATAATAAACCCTGAGGACGATTATATTTGGATACATGATTATCATCTGATGGTGCTACCAACTTTTATAAGAAGACGTTTTAACCGGGTGAAAATGGGATTTTTTCTGCATAGCCCCTTTCCATCTTCAGAGATATATCGTTCTCTGCCTGTCAGGGAAGAGATACTTAAAGCTTTACTTAACTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCAGTTGGGGTTCACATGGGTCGTATTAAATCAGTCATGAGATCGGCAGATGAGGAGTGTAAAGCAAGGGAACTGAAACAGCAATTTGAAGGAAAGACTGTCTTACTTGGTGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCTAGGGGTAACGGGATACATTTAGAGGGCATACGGAATGAAATACTAGAAAGCTGCAGCAGGATCAACAGAGTATTTGGGCGGCCTGGTTATGAACCTGTTGTTTTTATCGATAGACCAGTATCCATTGTTGAAAAAGTTGCTTATTATAGCATTGCTGAGTGTGTTGTTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATCGCTTGTAGGCAGGAAATATCTGGTTCTGAATCATGTGCTAATGTCAATGGCTCAAAGAGCATGCTAGTAATATCAGAATTTATAGGGTGTTCTCCATCACTCAGTGGAGCAATCCGTGTTAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAATTGCGGCATGACAAGCATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCTTGCATGATATGGAGAGGGCTTGCACAGACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTAAGCTTTGGATTTAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTGCAGCTTACACGAGGGCAAAGTGTAGGGCCATTTTGTTGGACTACGATGGTACTGTAATGCCACAGAATTCCATTAATAAGAGTCCAAGTCCGGAGGTCATCTCCATTTTGAATACACTTAGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGTAACTGGTTTACTCCCTGCAAAAAACTTGGCATTGCAGCAGAACATGGGTACTTCATGAGGTGGTCTGAGGGTGAAGAATGGGAAATTTGTGGTAAGAGCTCCGACTTTGGCTGGATGCAGATTGCTGAACCTGTCATGAAACTATATACAGAGGCAACTGATGGTTCTGGTATTGAGAAAAAGGAAAGTGCTTTGGTCTGGCAATATCGGGACGCAGACCTTGGGTTTGGATCTTCTCAAGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGACAGTTCATTGTTGAAGCAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAAGATATTTTCATCAATGGATGGGCGAGGAAAACAGGCTGATTTCGTGCTGTGTGTTGGCGATGATAGATCAGATGAGGATATGTTTGAAATAATTAGTAGTGCAATCTCAAGAAATATTCTTTCTGCCAAAAGTTCCGTATTTGCTTGTACAGTTGGACAAAAACCAAGCAAAGCTAAGTATTATGTGGACGATACAACTGAAGTCATAAGCATGCTAGAATCTTTGGCTGAAGAATCTGATTCTTCACCTGCTTAG 2547 0.4107 MMSRSYTNLLDLASGNFPALGKDFKEKKRLPRVMSVPGIISELDDDQAHSVSSDNPSTISTDRMIIVANQLPLKATRKEDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLTADVLSKFYDGFCKGQLWPLFHYMLPFSTDKSHRFDRSLWEAYVMANKIFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRSLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIKSVMRSADEECKARELKQQFEGKTVLLGVDDMDIFKGIDLKILAMEQMLRQHPKWQGRAVLVQIVNPARGNGIHLEGIRNEILESCSRINRVFGRPGYEPVVFIDRPVSIVEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQEISGSESCANVNGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMADGEKQLRHDKHYRYVSTHDVAYWSRSFLHDMERACTDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVAAYTRAKCRAILLDYDGTVMPQNSINKSPSPEVISILNTLSADSKNVVFIVSGRGRDSLSNWFTPCKKLGIAAEHGYFMRWSEGEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEAKPQDVSKGLVAEKIFSSMDGRGKQADFVLCVGDDRSDEDMFEIISSAISRNILSAKSSVFACTVGQKPSKAKYYVDDTTEVISMLESLAEESDSSPA 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0440 848 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Sto7g0440 848 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 847 - -
Sto7g0440 848 CDD GT20_TPS 63 545 IPR001830 GO:0003824|GO:0005992
Sto7g0440 848 CDD HAD_TPP 593 832 - -
Sto7g0440 848 Gene3D Glycogen Phosphorylase B; 317 529 - -
Sto7g0440 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 549 - -
Sto7g0440 848 Gene3D - 591 695 IPR023214 -
Sto7g0440 848 Gene3D - 720 847 IPR023214 -
Sto7g0440 848 SUPERFAMILY HAD-like 592 840 IPR036412 -
Sto7g0440 848 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 796 IPR006379 -
Sto7g0440 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 847 IPR001830 GO:0003824|GO:0005992
Sto7g0440 848 Pfam Glycosyltransferase family 20 63 545 IPR001830 GO:0003824|GO:0005992
Sto7g0440 848 Gene3D Glycogen Phosphorylase B; 56 316 - -
Sto7g0440 848 TIGRFAM T6PP: trehalose-phosphatase 589 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0440 Sto-Chr7 3223492 3227408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0440 1 846 Trehalose Biosynthesis Gene Families AT1G06410 76.978 0.0 1359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0440 K16055 - gmx:100811463 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0440 7 3223492 3227408 Sto7g0440 7 3223492 3227408 ECH