Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0439 ATGAGCAGCAACTCCAACAATTTCATACCTTTGCCTGGGGCATGGAGAACTGGTGTTAGACACTATGATGACCGTAGTCCCAATAATAATGGCTACCATGAGGTGCCTGTGGTTTACCACTCTCTTTCATTCCAAGGCACTCCTGATGATTGGATTTCAGGCGTGCATGATCTGCCAAGATTGATGGAAGATAGAACACCTTCAAGTTCAGGACTCAACAGCAGTTTTCCAACACAACCACATAGCAGACAACAAAGTAGTGTTCAGAATGGAGATATTAGAAGGGGATTCAACACCAGGTTCAGAGAGATTGTGCAGCCATCACCTGCAAGAGCATTAGAAAATCCCAGATCAGAAGCCTTAAGCAAGCTTAAGAAAGAAACCTATGATCCCACTCCAAAGCATTTACAAAAGAGAGTGAGCTTATGTTACAGAGACAGTGTTAAGAATGCTTTAAATGAGAGAGAAAGGGAAAAGCAAGAAGGTGGAAAGAGGTGTGCTATATGCTTGGAAGATTTTGAACCCAAAGAGGAGGTGGTGCTCACTCCATGCAAGCATTTGTTTCATGAGGATTGTGTAGTACCATGGGTAACAAGCAAAGGTCAATGCCCAGTTTGTAGATTTGTGATTTATGAGAAGGCAAAGGAGAACCCAGCATCATCcttcaacaacaataataacttAGCCATTATGGCACCAAGTGATCTCCTAATTGCAGGAGAACTTCTATCAATTTTCAGGGTCATGCGTGATACTTTCCATTTGGGCAATGGAACTCACTATCATTAG 789 0.417 MSSNSNNFIPLPGAWRTGVRHYDDRSPNNNGYHEVPVVYHSLSFQGTPDDWISGVHDLPRLMEDRTPSSSGLNSSFPTQPHSRQQSSVQNGDIRRGFNTRFREIVQPSPARALENPRSEALSKLKKETYDPTPKHLQKRVSLCYRDSVKNALNEREREKQEGGKRCAICLEDFEPKEEVVLTPCKHLFHEDCVVPWVTSKGQCPVCRFVIYEKAKENPASSFNNNNNLAIMAPSDLLIAGELLSIFRVMRDTFHLGNGTHYH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0439 262 MobiDBLite consensus disorder prediction 62 93 - -
Sto7g0439 262 ProSiteProfiles Zinc finger RING-type profile. 166 207 IPR001841 -
Sto7g0439 262 CDD RING-H2_PA-TM-RING 166 207 - -
Sto7g0439 262 MobiDBLite consensus disorder prediction 66 93 - -
Sto7g0439 262 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 3 257 - -
Sto7g0439 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 224 IPR013083 -
Sto7g0439 262 Pfam Ring finger domain 165 207 IPR001841 -
Sto7g0439 262 SUPERFAMILY RING/U-box 156 217 - -
Sto7g0439 262 SMART ring_2 166 206 IPR001841 -
Sto7g0439 262 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 3 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0439 Sto-Chr7 3221213 3222950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0439 42 257 C3H Transcription Factor Family AT3G58720 41.202 5.87e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0439 - K11982 aip:107630161 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0439 7 3221213 3222950 Sto7g0439 7 3221213 3222950 ECH