Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0414 ATGTTTCCCGGGTCTTTGGGCTTCTTGAATAGGCGAAATAGCTCGGATTCAAGAGATGAAAGCTGCATAATACCCTTTATAATCAACACAGGGGATGTCAAAAATGTTGAAAGAGGAAAAGAAGACCAAGGTAGAGATAAAATTGAGAGAAGGGAAAACGAAGTTGCAGAATCTACAGGGTCTAGTAGCAAGTTAAATAAAGCAAACTCACCTACTCCCACGGGTTTCAATAAGTCACGTACGACTGCCAGCTCCTTCTCTGACTCGTCTTCAACGGATAGAAATGCAACGGCTAGTGATGGGTCAAGCCTGTCACCACGTGACAAAAGTTCAGAAGTTTCAGGTTCAAGCTCAGGCACTCATCAATCACGTGATCACTTAAGTCAGCCCCGTGACCTTGTCTTAAGTACTAGTGGAGTGCAACATGAATTAAGTGGAGTGAGTCCCGTGATGGACCAACAAAATACTCACACTGAAGCCCAACACGAAGTCCAACATGGTGGAACGCATCAGATGGTAACTCGGGCCAAAGCAGGCATTCACAAGCCCAAGTATCCCTTTGTAGAAGTTCACAGAGACGAGTCTGGGTTCCACTTGAGTCAGGCCAAGTACGTTCTGGATGTGTTGAAGAAGTTCAACTTGTTGACTTGCTCACCAGCTCCAACCCCAATGGTCACAGGAAAGCCATTTGTAGCTCTTGAAGGTGCACCAATGAAAAATCCTTCTACTTATAGACAAGCAATTAGCTCACTTCAATACTTGGTAACCACAAGGCCTGACATAGCCTTCTCGGTCAATAAATTAAGTCAATACTTATCAAGTCCCACAGAGCTCCATTTTCAGGGGAGCTTGTATATTGTTAGCATATCGTATAAACAAGATGGGATCTTGTTGTCTTTGGGTAGCAAGTTAATTTGTGTTGATCCGTTTGCTGAGGCAAATGCTGAGGACTCTGGTGCTGGGACAAAGGACTATGTGCATATACGCATACAGCAGAGAAATGGTAGAAAGAGCCTGACAACTGTCCAGGGACTGAAGAAAGAATTCAGCTATAACAAGATACTTAAAGACCTGAAGAAAGAGTTCTGCTGCAATGGTACAGTTGTGGAAGACCCAGAACTAGGACAGgtTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTACCTTCTTAGTCCAGGTAACTATTGCCTTTAGGGTTAATGCAGTTTTGTGTGCAAATCTTATATTATCTGTATCTTTAGGAAGTTCATTCTTGTTATGTTGTTCCATCTTCCGAGTGCTACTTTCTTTATCTGTGCTTTCCATGGCTGGTATTTTGAAGAAGGAGCATATCAAGATTCATGGTTTCTGA 1356 0.4285 MFPGSLGFLNRRNSSDSRDESCIIPFIINTGDVKNVERGKEDQGRDKIERRENEVAESTGSSSKLNKANSPTPTGFNKSRTTASSFSDSSSTDRNATASDGSSLSPRDKSSEVSGSSSGTHQSRDHLSQPRDLVLSTSGVQHELSGVSPVMDQQNTHTEAQHEVQHGGTHQMVTRAKAGIHKPKYPFVEVHRDESGFHLSQAKYVLDVLKKFNLLTCSPAPTPMVTGKPFVALEGAPMKNPSTYRQAISSLQYLVTTRPDIAFSVNKLSQYLSSPTELHFQGSLYIVSISYKQDGILLSLGSKLICVDPFAEANAEDSGAGTKDYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQVTIAFRVNAVLCANLILSVSLGSSFLLCCSIFRVLLSLSVLSMAGILKKEHIKIHGF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0414 451 Pfam Translation initiation factor SUI1 323 394 IPR001950 GO:0003743|GO:0006413
Sto7g0414 451 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 307 398 - -
Sto7g0414 451 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 305 398 IPR005874 GO:0003743
Sto7g0414 451 MobiDBLite consensus disorder prediction 1 20 - -
Sto7g0414 451 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 307 398 - -
Sto7g0414 451 ProSiteProfiles Translation initiation factor SUI1 family profile. 326 396 IPR001950 GO:0003743|GO:0006413
Sto7g0414 451 SUPERFAMILY eIF1-like 304 398 IPR036877 GO:0003743|GO:0006413
Sto7g0414 451 Gene3D - 294 404 - -
Sto7g0414 451 CDD eIF1_SUI1 324 398 IPR005874 GO:0003743
Sto7g0414 451 MobiDBLite consensus disorder prediction 34 57 - -
Sto7g0414 451 MobiDBLite consensus disorder prediction 58 129 - -
Sto7g0414 451 MobiDBLite consensus disorder prediction 30 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0414 Sto-Chr7 3024028 3030897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0414 308 451 Eukaryotic Initiation Factors Gene Family AT1G54290 62.500 3.12e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0414 K03113 - oeu:111397329 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0414 7 3024028 3030897 Sto7g0414 7 3024028 3030897 ECH