Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0406 ATGCTGTTTGGGACATTAGGAAGTGTTGGAGATGGGCTTCAAACACCACTTATGATGTACATTCTTAGCGATGTCATCAACGCCTATGGAGACCCCAATACTGTTCTGACAAAGCAAGATGTAAACAAGTATGCACTAAGGCTTTTTCTTGCTGCAATTGGAGTTGGACTTTCAGCTTTTGTTGAAGGAATATGTTGGACAAGAACTGCTGAGAGACAGACCTccagaatgagaatggaataccTAAAATCTGTTCTTAGACAAGAAGTTGGTTTCTTTGACACTCAGGCTGCTGGTTCTTCAACAACCTACCAAGTTGTCTCACTCATTACTGCTGATGCCAATACAATCCAAGATGCTTTGTCTGAAAAGATACCCAACTGCCTGGCTCACATGTCAACATTCTTCTTCTGCCACATCTTTGCTTTTGTACTATCATGGAGACTTACGTTGGCAGCCATACCACTCTCAGTCATGTTCATCGTTCCGGCACTTGTGTTTGGGAAGTTCATGTTGGATGTAGCAATGAAAATGATTGAATCCTATGGGGTTGCTGGTGGGATTGCAGAACAGGCAATATCTTCAATAAGAACTGTTTATTCTTATGTAGGGGAGAATCAAACACTAAACAGATTTAGCAGTGCACTTGAGAAAGTCATGGAATTGGGAATAAAGCAAGGTTTTGCAAAGGGGTTGATGTTAGGAAGCCTgggagttatatatataagttgggGTTTTCAGGCTTGGGTTGGAACCTTTTTAATCGCTGAAAAAGGAGAAGAGGGTGGCCATGTATTTGTAGCTGGCTTCAATGTCCTCATGGGAGGCCTGAGTGTTTTAAGTGCTCTTCCAAATTTAACTGCAATCACAGAGGCAACTGCGGCCGTCACTCGTCTCTTTGAAATGATTGATAAGGTGCCAAGTATAGATTCTGAAGACAAAAAGGGAAAAGCTTTATCCTATGTGAGAGGAGAAATTGAATTTCAAGATGTTTACTTTTGTTACCCATCTAGGCCAGATACCTCAGTCTTACAAGGACTGAATCTTACAATTCCAGCAGGCAAAAGAGTAGGTCTTGTGGGAGGTAGTGGTTCAGGCAAGTCAACTATCATTGCACTGCTTGAGAGATTTTATGATCCCATTGAGGGAGAAATACTGTTAGATGGCCACAAGATCAGTAGACTTCAATTGAAATGGTTGAGATCTCAGATTGGGCTAGTAAATCAAGAGCCTGTTCTTTTTGCCACATCTATTAAGGAAAATGTATTGTTTGGAAAAGAAGGGGGTTCAATGGACAGTGTGATAAATGCATGTAAAGCAGCAAATGCACATGATTTCATTGTCAAATTACCAGACGGATATGAAACTCAAGTTGGGCAGTTTGGATTCCAATTATCTGGTGGGCAGAAGCAGCGAATTGCCATAGCGAGAGCTTTACTTAGGGATCCAAAGGTTCTACTACTTGATGAAGCTACTAGTGCATTGGATGCACAATCTGAAAGAGTAGTGCAGGAAGCAATTGATCAAGCTTCAAAAGGAAGAACTACAATCATTATTGCTCATCGTTTGTCTACGATACAATATGCCCACATGATAGCAGTTCTTCAAGCAGGAAGAGTTATTGAATCAGGTACTCACAAAGAGCTTATGGAAATGAACAATGGAGAAGGAGGAGAATATGCAAGGATGGTAGAGTTGCAGCAAGTAACAACACAAGATGAAGATTCCAGAAATCTCAGTCCTCAAATAGAGGGAAGGAATCACCACCACAGGATAGGCATTCCATCTAGTCCAGCAACAAGTATCAGATCAAGCGTGCAAGGCACTCCGATGTTATATCCCTTTAGCCAGGCATTTTCCATTGGCACACCCTACTCCTACTCAATCCAATATGACCCTGAAGATGATAGTTATGAAGATGACTTCAAGAGATCAACTTATCCAGCTCCTTCCCAATGGCGTTTGCTGAAGATGAATGCACCTGAGTGGGTTAGCGCAATGCTTGGATGCTTGGGAGCAATAGGCTCAGGAGCAGTACAACCAGTGAATGCATACTGTGTGGGAACACTTATATCAATTTACTTCAAAACTGACACATCTGAGATGAAGTCTAAAGCCAAAGTCTTGGCCCTTGTTTTCTTGGGAATTGGAGTTTTTAACTTCGTCACAAGTATTGTTCAACACTATAATTTTGCAGTAATGGGGGAAAGATTAACTAAAAGAATACGGGAAAAACTGCTAGGAAAGTTGATGACTTTTGAGATAGGGTGGTTTGATAATGAAGAGAACACAAGTGCAGCTATTTGTGCTAGATTATCCTCTGAAGCTAACATGGTTCGATCCCTTGTTGGGGATCGTATGTCATTGTTGGCACAAGCAATTTTTGGGTCCATTTTTGCTTATGCTCTTGGACTGGTGCTTACATGGAGGCTAGCCCTTGTGATGATTGCAGTGCAGCCATTAGTCATTGGAAGCTTTTACTCAAGGAGTGTCTTGATGAAGAGTATGGCAGAAAAAGCCCGAAAAGCACAAAAGGAAGGAAGCCAACTGGCAAGTGAAGCTGTAATAAACCACAGAACCATAACTGCCTTCAGTTCTCAGAAAAGAATGTTATCCCTTTTCAAATCTACAATGGTAGGTCCTAGAAAGGAGAGTGTTAGGCAGTCATGGATTTCAGGCTTTGGTCTTTTCAGCTCCCAGTTTTTCAACACTGCATCAACAGCCTTAGCTTACTGGTATGGTGGGAGGCTCTTGATAGATGGGCTGATTGAACCAAAGCATCTTTTTCAAGCATTTTTAATATTGCTTTTCACTGCATATATCATAGCAGAAGCTGGAAGCATGACTTCTGACTTATCCAAAGGAAGCAGTGCAGTTCGATCAGTTTTTGCTATCTTGGACAGGAAAAGTGAGATTGATCCTGAGAGCACATTGGGAGTAGACATAAAGAGGAAATTAAGAGGACGAGTAGAACTTAAAAGTGTTTTCTTTGCATATCCAACAAGACCTGAGCAGATGATATTCAAGGGTTTGTGTCTTAAAGTAGAGGCAGGGAGAACAGTAGCACTAGTGGGACAAAGTGGCTGTGGTAAATCAACTATTATTGGTCTTATTGAGAGGTTTTATGAACCTGTAAATGGATTGGTATGTATAGATGATCAGGACATTAAGTCATACAGTTTGAGAGTATTAAGGTCACATATTGCCCTTGTAAGCCAGGAGCCAACCCTTTTTGCCGGAACCATTAGAGAAAACATTGCCTATGGGAAAGAAAAGGCAACTGAAAGTGAGATTAGAAAGGCTGCAACTCTAGCTAATGCTCATGAATTTATAAGCGGAATGAGTGATGGGTATGAAACAAACTGTGGAGAAAGAGGAGTTCAGCTATCAGGAGGACAGAAGCAGAGAATAGCCTTAGCTCGAGCTATACTGAAGAATCCTGCAATTCTACTGCTAGATGAGGCTACAAGTGCACTTGATAGTGTGTCAGAGAAGTTAGTGCAAGAAGCACTTGAGAAGATGATGGTTGGAAGAACATGCATAGTTGTGGCTCACAGGCTATCTACCATACAGAAATCCAACTCCATTGCTGTGATAAAGAATGGGAAAGTTGTGGAACAAGGTTCACACAATGACTTAATTTCCCTAGGACGAGATGGAGCTTACTATTCTCTTGTTAAACTTCAAAATGCTACATCTGATCCAAGGTAA 3711 0.4088 MLFGTLGSVGDGLQTPLMMYILSDVINAYGDPNTVLTKQDVNKYALRLFLAAIGVGLSAFVEGICWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQAAGSSTTYQVVSLITADANTIQDALSEKIPNCLAHMSTFFFCHIFAFVLSWRLTLAAIPLSVMFIVPALVFGKFMLDVAMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLNRFSSALEKVMELGIKQGFAKGLMLGSLGVIYISWGFQAWVGTFLIAEKGEEGGHVFVAGFNVLMGGLSVLSALPNLTAITEATAAVTRLFEMIDKVPSIDSEDKKGKALSYVRGEIEFQDVYFCYPSRPDTSVLQGLNLTIPAGKRVGLVGGSGSGKSTIIALLERFYDPIEGEILLDGHKISRLQLKWLRSQIGLVNQEPVLFATSIKENVLFGKEGGSMDSVINACKAANAHDFIVKLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQEAIDQASKGRTTIIIAHRLSTIQYAHMIAVLQAGRVIESGTHKELMEMNNGEGGEYARMVELQQVTTQDEDSRNLSPQIEGRNHHHRIGIPSSPATSIRSSVQGTPMLYPFSQAFSIGTPYSYSIQYDPEDDSYEDDFKRSTYPAPSQWRLLKMNAPEWVSAMLGCLGAIGSGAVQPVNAYCVGTLISIYFKTDTSEMKSKAKVLALVFLGIGVFNFVTSIVQHYNFAVMGERLTKRIREKLLGKLMTFEIGWFDNEENTSAAICARLSSEANMVRSLVGDRMSLLAQAIFGSIFAYALGLVLTWRLALVMIAVQPLVIGSFYSRSVLMKSMAEKARKAQKEGSQLASEAVINHRTITAFSSQKRMLSLFKSTMVGPRKESVRQSWISGFGLFSSQFFNTASTALAYWYGGRLLIDGLIEPKHLFQAFLILLFTAYIIAEAGSMTSDLSKGSSAVRSVFAILDRKSEIDPESTLGVDIKRKLRGRVELKSVFFAYPTRPEQMIFKGLCLKVEAGRTVALVGQSGCGKSTIIGLIERFYEPVNGLVCIDDQDIKSYSLRVLRSHIALVSQEPTLFAGTIRENIAYGKEKATESEIRKAATLANAHEFISGMSDGYETNCGERGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSVSEKLVQEALEKMMVGRTCIVVAHRLSTIQKSNSIAVIKNGKVVEQGSHNDLISLGRDGAYYSLVKLQNATSDPR 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0406 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 990 1226 IPR003439 GO:0005524
Sto7g0406 1236 CDD ABC_MTABC3_MDL1_MDL2 990 1229 - -
Sto7g0406 1236 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 972 - -
Sto7g0406 1236 CDD ABC_MTABC3_MDL1_MDL2 326 567 - -
Sto7g0406 1236 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1230 - -
Sto7g0406 1236 SMART AAA_5 353 545 IPR003593 -
Sto7g0406 1236 SMART AAA_5 1017 1209 IPR003593 -
Sto7g0406 1236 SUPERFAMILY ABC transporter transmembrane region 653 973 IPR036640 GO:0005524|GO:0016021
Sto7g0406 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 326 562 IPR003439 GO:0005524
Sto7g0406 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 291 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto7g0406 1236 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1230 IPR039421 -
Sto7g0406 1236 SUPERFAMILY ABC transporter transmembrane region 1 310 IPR036640 GO:0005524|GO:0016021
Sto7g0406 1236 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 299 - -
Sto7g0406 1236 Gene3D - 981 1235 IPR027417 -
Sto7g0406 1236 ProSitePatterns ABC transporters family signature. 465 479 IPR017871 GO:0005524
Sto7g0406 1236 Gene3D - 324 586 IPR027417 -
Sto7g0406 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 668 954 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto7g0406 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 985 1229 IPR027417 -
Sto7g0406 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 567 IPR027417 -
Sto7g0406 1236 MobiDBLite consensus disorder prediction 571 600 - -
Sto7g0406 1236 ProSitePatterns ABC transporters family signature. 1129 1143 IPR017871 GO:0005524
Sto7g0406 1236 Pfam ABC transporter transmembrane region 668 939 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto7g0406 1236 Pfam ABC transporter transmembrane region 1 276 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto7g0406 1236 Pfam ABC transporter 344 493 IPR003439 GO:0005524
Sto7g0406 1236 Pfam ABC transporter 1009 1157 IPR003439 GO:0005524
Sto7g0406 1236 Gene3D ABC transporter type 1, transmembrane domain 51 896 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0406 Sto-Chr7 2975118 2980446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0406 662 1234 Calmodulin-binding Proteins AT2G36910 38.648 9.54e-115 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0406 K05658 - gmx:100788127 2088.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0406 7 2975118 2980446 Sto7g0406 7 2975118 2980446 ECH