Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0401 ATGGTTGGCCCGGAAAACACCAATTGGCTTTTCGATTATAGCTTAATTGACGATATAACTGTCCCGGAGGAGACCTTCACTGTCCCTGCTTCCGGGTTCAGCTGGCCGGCGCAGGCCCTGAATGGTTCTTCGAATGTCAATGTTGAAATTGATGGCTCGTTGGGGGATTCTGATGGTGTAAAAGAGTCTGGTTCAAAGAAGAGGGGTAGATCtgattcatgtgctgctactagcTCAAAGGCATGTCGGGAGAAGTTGCGGAGGGATAGGCTGAATGACAAGTTTGTTGAATTAGGCTCCATCTTGGAGCCTGGAAGGCCTCCCAAAACTGACAAAGCTGCTATTCTGGTTGATGCTGCCCGAATGGTGACACAGTTACGAGAGgaagcccaaaaattgaaagacTCAAATACGGGTCTTCAAGAAAAGATTAAAGAGCTAAAGGCTGAGAAGAATGAACTTCGTGACGAGAAACAGAGGCTCAAGGCAGAGAAAGAAAAGTTGGAGCAGCAGCTGAAAGCCATCAATGCTCAACCTAGTTTCATGCCTCCTCCTCCTGCAATCCCTGCTGCATTTGCTGCTCAAGGTCAAGCTCCTGGCAGCAAGCTGGTACCTTTTATCAGTTACCCAGGAGTTGCCATGTGGCAATTTATGCCACCAGCTGCAGTGGATACTTCACAGGACCATGTACTCCGTCCTCCAGTCGCCTAA 711 0.4599 MVGPENTNWLFDYSLIDDITVPEETFTVPASGFSWPAQALNGSSNVNVEIDGSLGDSDGVKESGSKKRGRSDSCAATSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILVDAARMVTQLREEAQKLKDSNTGLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKAINAQPSFMPPPPAIPAAFAAQGQAPGSKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0401 236 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 236 - -
Sto7g0401 236 CDD bHLH_AtILR3_like 80 155 - -
Sto7g0401 236 Coils Coil 116 178 - -
Sto7g0401 236 Gene3D - 78 155 IPR036638 GO:0046983
Sto7g0401 236 SMART finulus 81 132 IPR011598 GO:0046983
Sto7g0401 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Sto7g0401 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Sto7g0401 236 CDD bZIP 141 173 - -
Sto7g0401 236 MobiDBLite consensus disorder prediction 51 79 - -
Sto7g0401 236 PANTHER BHLH TRANSCRIPTION FACTOR 1 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Sto7g0401 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 145 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0401 Sto-Chr7 2929760 2932835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0401 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 74.477 1.24e-120 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto7g0401 HLH 6.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0401 - - jre:109014401 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0401 7 2929760 2932835 Sto7g0401 7 2929760 2932835 ECH