Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0399 ATGGTCTCCAAGAACCAGAACCGTCCTCCATTATCACTCGCATCCGCACCTTCAACTCCTTCAAAGTTTCAGAGGTTTGTGGGTGATGAGGTGGTTGTAGACAGAGACCTGCAAGCTGGAGCAGAGAAGATGGTGGGAACTCCGATCAATGGAAGAACACGTCAAGCTTTTATGGTTGTCAATGGTGGACACGATCTTGGGCTTGGGCCGAGCAGTGCCCCGCCAAGCAATGCCGGGTCGGATTGTGGGATTATAGAGTTCACAAGGGAGGATGTGGAAGCGTTGCTGAATGAGAAAGCCAAAAAGAAGGACAGATTTAATTATAAGGAAAGATGTGAAAACATGGTGGAATATATAAAAAGGCTTAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGTTGAGCTACTCACTTGAGCAAGAAAAGTTGAAGAACTCATTGGAATTGACCCAGCAAAAATGCATAGAAATTGagTTGCTGCTTAAAATCAAGGAAGAAGAACTGAATTCAATTATCTCGGAAATGAGAAGGAATTGCACTTCTATGCAAGAAAAATTAATCAAGGAAGAAGCAGAGAAGTCGGCGGCAGTGGAATCTcttgagaaagagagagaggctaGGATTAACTTTGAGAGGTCACAGGCTACTCTATCAGATGACCTTGGGAGAGCTCAAAGAGAGCTTCAAAGTGCAAATCAGAAGATATCATCACTCAATGATATGTACAAGCGGTTACAGGATTACATAACAAGCTTACAACAATACAATGGAAAGCTTCATACGGAGCTTTCTACGGTCGAAGAAGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGCAGTGGAGAATCTCACCATGTTAAAGGGTCAACTTACCTTGTGCAGATCTTCCCAAGATGAGGCTGTGAAACAGAAGGATGCCCTAGCTAGTGAACTTTCATCTCTTAGAGGAGAGTTGCAACAGGCAAGAGTTGATCGGGATCAACAATTATCTCAAGTGCAAACATTATCTTCTGAATTAGTGAAATTTAAAGAATCTACCGAAAAGTCTTGCACCGAACTAAGCAGCTTGactgtaaaagcaaatgaaCTGGAGGTAAAATGTTCCTTGCAAGAAAGCCAGATAAAGACATTGCAAGAGAAACTAACAACTGCAGAGAATAAGATACAgGTGTCTGATATATCTGCATTTGAGACAAGGACAGAATTTGAAAGTCAACAGAAACTTGTTGATGAGTTGCAAAGGCGTCTGGCTGATGCAGAATATAAACTTGTAGAAGGGGAGAAGCTGCGGAAAAAATTACATAACACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTAGAGTGCGACCTTTGTTGCCTGATGAAAGTTGTAATGCAGAAGGCAAGTTTATCTCTTATCCCACATCAATGGAAACTTCTGGAAGAGGCATTGATTTAACCCAAGGTGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTCACGCCAGACACATCACAAGAAGAAGTTTTTGTGGAAATTTCACAGCTTGTACAGAGTGCTCTTGATGGTTATAAGgtTTGTATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGGAGGCCTGGACATCCTGGGGAAAAAGGTTTGATACCTCGTTCATTAGAACAGATCTTTCAAACAAGGCAGTCTCTGGAACCCCAAGGCTGGAAATATGAATTGCAGGTGTCAATGTTGGAAATATATAATGAAACCATTCGCGATCTGTTATCTACAAATAGATCGTCCTTAGATGTAACACGCGTAGAAAATGGTACTCCTGGAAAGCAATATACGATTAAACATGACGCCAACGGAAATACACACGTTTCTGATCTTACTGTAGTGGATGTTCAGAGTGCTAAAGAGGTTGCTTTTCTCCTAAATCAAGCAGCACATAGCAGGTCCGTAGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACCCTTCGAATATACGGTGTTAACGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGCGAGCGTCTATCAAAGAGTGGATCAACGGGGGACCGATTGAGAGAAACTCAAGTATGTAAAGCAATTCAGGCAATCAATAAAAGTTTGTCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGAAGACCACGTACCATACAGGAACTCAAAGCTTACATATCTACTTCAGCCTTGTCTTGGTGGAGACTCAAAGACATTAATGTTTGTGAACATATCTCCCGAACCATCTTCAGTGGGAGAGTCACTATGCTCACTCCGGTTCGCTTCCAGAGTAAATGCTTGCGAGATAGGGACGCCTCGGAGACAGACCAATGGACGCCCGACGGACTCGCGCTTGAGCTATTTCTGA 2436 0.4146 MVSKNQNRPPLSLASAPSTPSKFQRFVGDEVVVDRDLQAGAEKMVGTPINGRTRQAFMVVNGGHDLGLGPSSAPPSNAGSDCGIIEFTREDVEALLNEKAKKKDRFNYKERCENMVEYIKRLKVCIRWFQDLELSYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIISEMRRNCTSMQEKLIKEEAEKSAAVESLEKEREARINFERSQATLSDDLGRAQRELQSANQKISSLNDMYKRLQDYITSLQQYNGKLHTELSTVEEELKRVEKEKATAVENLTMLKGQLTLCRSSQDEAVKQKDALASELSSLRGELQQARVDRDQQLSQVQTLSSELVKFKESTEKSCTELSSLTVKANELEVKCSLQESQIKTLQEKLTTAENKIQVSDISAFETRTEFESQQKLVDELQRRLADAEYKLVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDESCNAEGKFISYPTSMETSGRGIDLTQGGQKHSFTFDKVFTPDTSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTRQSLEPQGWKYELQVSMLEIYNETIRDLLSTNRSSLDVTRVENGTPGKQYTIKHDANGNTHVSDLTVVDVQSAKEVAFLLNQAAHSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQVCKAIQAINKSLSSLSDVIFALAKKEDHVPYRNSKLTYLLQPCLGGDSKTLMFVNISPEPSSVGESLCSLRFASRVNACEIGTPRRQTNGRPTDSRLSYF 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0399 811 PRINTS Kinesin heavy chain signature 520 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 PRINTS Kinesin heavy chain signature 654 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 PRINTS Kinesin heavy chain signature 685 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 PRINTS Kinesin heavy chain signature 740 761 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 SMART kinesin_4 442 798 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 Coils Coil 85 105 - -
Sto7g0399 811 Gene3D Kinesin motor domain 392 792 IPR036961 -
Sto7g0399 811 PANTHER KINESIN-LIKE PROTEIN 34 810 - -
Sto7g0399 811 Coils Coil 172 203 - -
Sto7g0399 811 Coils Coil 256 290 - -
Sto7g0399 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 788 IPR027417 -
Sto7g0399 811 Coils Coil 361 388 - -
Sto7g0399 811 Pfam Kinesin motor domain 450 788 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 CDD KISc_C_terminal 442 792 - -
Sto7g0399 811 ProSiteProfiles Kinesin motor domain profile. 444 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto7g0399 811 ProSitePatterns Kinesin motor domain signature. 684 695 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto7g0399 811 Coils Coil 214 248 - -
Sto7g0399 811 Coils Coil 305 325 - -
Sto7g0399 811 MobiDBLite consensus disorder prediction 1 21 - -
Sto7g0399 811 Coils Coil 403 430 - -
Sto7g0399 811 PANTHER KINESIN-LIKE PROTEIN KLP-3 34 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0399 Sto-Chr7 2920370 2924771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0399 364 802 Calmodulin-binding Proteins AT5G65930 35.730 2.06e-77 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0399 7 2920370 2924771 Sto4g0025 4 261986 268026 CCT
Sto7g0399 7 2920370 2924771 Sto7g0399 7 2920370 2924771 ECH