Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0396 CTGAAACCTCCTCCTGGGAGGGTAGGAACCACCACTTCTGGATTGCCTCCTTTAAAACCTCCTCCAGGCAGATTGAACCCCCTTCCACCTGAACCACCTTCTTTTAGACCTAATAAAGCTGCTGCTCCTCCTCCTACACCTCCTGCACCCTCACCACCCGTGAAATCTCATTTTGATGCTGGTGGGGCTCCACCTCCTGGACCTCCTCCACCTCCTGCACCACCACAACCTGTGAAACGTCATTCTGATGCTGGTGGAGCTTCACCTCCTGGacctcctcctccaccaccacctcTTGGTGCCAAACCAGGTGGTCGTCCACCACCTCCGCCTCCTCCTAAGGGTGGTATAGGTCCTCCTCGACCTCCTCCTATTGGTCCAAAGATGGTTCGACCCGATGGACCAAAAGCTACACAGAATGTGGGAGCTAGTTCAGAAGTTGAAGCTGATGCTCCTAAAGCCAAGTTAAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAATCAATGGTTTGGAGTCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAAACACTTTTTGGCTATAGTGCTGTGGATAAAAACAAAGGTGAACTGAAGAAAGAGTCATCCTCTCAAGACCCTTCAACCCAGTATATGCAGataattgacaggaaaaaagcacaaaatttgttaattttattgcGAGCTCTAAACGTGACAATGGAAGAAGTTTGTGATGCACTTCATGAGGGAAACGAGCTTCCCTCAGAATTTCTTCAAACCTTGCTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTGAAATATCTCAACTTGGGCCTGCAGACCAGTTCTTAAAATTCCTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGGGTACTCTTCAAGAGGAGCTCACTGCCACTAAGGAGTCCTTTGCAAttttagagGTTGCATGTAAGGAGCTAAGAAACAGTAGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGACGGAACATTCCGTGGTGGTGCGCAAGCATTCAAACTCGAAACACTTCTGAAATTATCTGATGTGAAAGGAACAGATGGCAAGACTACACTTTTACACTTTGTAGTCCAAGAGATAATCCGCTCCGAGGGCAAAAGAGCTGCTCGTTTGGCAAATGAAAACCTGAGTTCCTCTAGTATTAAAACAGATGGCCTTAATGAGGATATCTCtgatgaaaaagaagaacaCTACCATGATCTTGGTCTTCAGGTGGTTTCACATTTGAGTAGTGAACTTGAGAATGTCAAGAAAGCAGCAACAATAGATGCCGACAGCATAACAGGAACAACTGCCAAACTTGGCCATGGTTTCCTGAAAACTAGAGATTTCGTGAACACAGACTTGAAAAGCATAAAGGAAGATAGAGGGTTTTATGAGACAGTGAAGAGTTTTGTGCAGGATGCTGAGAGCGACGTCACGAGTCTgcttgaagaagaaaagaaaatcatggCTCTGGTGAAGAGCACCGGTGATTATTTTCATGGGAAAGCTGGGAAAGATGAGGGGTTGCGGCTGTTTGTAATAGTAAGGGACTTCTTAATAATGTTGGATAAGGTATGCAAAGAGGTAGGAGATGCACAGAAGAAGGCAGCAAAAACTCAGAAACACCAGAAATCAAAAACCCCATCTTCATCTGATGTTCGTTCGCCACCTGATTTTCGTCAGTTGCTATTTCCAGCAATTTCAGACAGGAGGATAAAAGACGATAGTAGTTCAGATGAAGAGAGTCCATAG 1842 0.4224 LKPPPGRVGTTTSGLPPLKPPPGRLNPLPPEPPSFRPNKAAAPPPTPPAPSPPVKSHFDAGGAPPPGPPPPPAPPQPVKRHSDAGGASPPGPPPPPPPLGAKPGGRPPPPPPPKGGIGPPRPPPIGPKMVRPDGPKATQNVGASSEVEADAPKAKLKPFFWDKVQANSDQSMVWSQIKSGSFQFNEEMIETLFGYSAVDKNKGELKKESSSQDPSTQYMQIIDRKKAQNLLILLRALNVTMEEVCDALHEGNELPSEFLQTLLKMAPTSEEELKLRLFSGEISQLGPADQFLKFLVDIPFAFKRMEALLFMGTLQEELTATKESFAILEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLETLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKRAARLANENLSSSSIKTDGLNEDISDEKEEHYHDLGLQVVSHLSSELENVKKAATIDADSITGTTAKLGHGFLKTRDFVNTDLKSIKEDRGFYETVKSFVQDAESDVTSLLEEEKKIMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIMLDKVCKEVGDAQKKAAKTQKHQKSKTPSSSDVRSPPDFRQLLFPAISDRRIKDDSSSDEESP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0396 613 Pfam Formin Homology 2 Domain 149 552 IPR015425 -
Sto7g0396 613 SUPERFAMILY Formin homology 2 domain (FH2 domain) 108 570 - -
Sto7g0396 613 MobiDBLite consensus disorder prediction 87 130 - -
Sto7g0396 613 MobiDBLite consensus disorder prediction 15 54 - -
Sto7g0396 613 PANTHER FORMIN-LIKE PROTEIN 1 110 - -
Sto7g0396 613 PANTHER FORMIN-LIKE PROTEIN 108 610 - -
Sto7g0396 613 MobiDBLite consensus disorder prediction 597 613 - -
Sto7g0396 613 MobiDBLite consensus disorder prediction 62 78 - -
Sto7g0396 613 MobiDBLite consensus disorder prediction 565 613 - -
Sto7g0396 613 PANTHER FORMIN-RELATED 1 110 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto7g0396 613 PANTHER FORMIN-RELATED 108 610 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto7g0396 613 Gene3D Formin, FH2 domain 151 583 IPR042201 -
Sto7g0396 613 MobiDBLite consensus disorder prediction 1 150 - -
Sto7g0396 613 SMART it6_source 146 570 IPR015425 -
Sto7g0396 613 ProSiteProfiles Formin homology-2 (FH2) domain profile. 146 578 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0396 Sto-Chr7 2899011 2902027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0396 105 573 FH2 protein (formin) Gene Family AT3G25500 46.764 6.44e-128 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0396 - - gmx:100793413 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0396 7 2899011 2902027 Sto4g0026 4 276953 281521 CCT
Sto7g0396 7 2899011 2902027 Sto7g0396 7 2899011 2902027 ECH