Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0393 ATGCCAACAGTTTGGTTCTCTCTGAAGAGGTCTCTCCACTGCAAATCAGAACCATCAGAAGTTCATGACCCAAAATCCAGAAAGCACTTGAGCACAATCTTGACCAAAAGAGCAGGAAGGTCTGGTTGTTCAAGGAGTATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCATCTGGAGAAGCCACCTAGCTGCAGCCCAAGATCTATAGGAAGCAGTGAGTTCCTCAACCCCATAACCCATGAAGTTATTCTTAGTAACTCAAGGTGTGAGCTCAAAATCACTGGATTTGGAGGATTCCAAGggtCTACTTTTGTGGGTACTTTAAGGCCTGGGACTCCTGGGCCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACATCAGCTACTCCTCCAAGGAAATCTCCTAGTGCTTTTCTTTTATCAGAGAAAGAAGGTTCTGCTTTGCATGGTGGGCTTCATTCTAGCAATAGGTTGTCTCTTGAGACTGATTTTAATGGCTGTTCTACTGTGACTTGTCACAAATGTGGTGAGCAATTCAGCACATGGGATTCTGCTGAATCTCATCATCTCTCCAAGCATGCTGGTAAAAATCATGAATCTCTCTGTTCTTTTTTTCATATGACAGTTACTGAACTTGTGGAAGGAGATTCTTCAAGAAAGATAGTGGAGATAATATGCAGGACTAGCTGGTTGAAGTCTGAGAATCACTGTGGGAGAATTGAGAGAGTTTTGAAAGTTCACAATATGCAGAAGACATTGGCTAGATTTGAGGAGTACAGAGAAATGGTGAAGATCAAAGCCAGCAAGCTCCCAAAGAAGCATCCTAGGTGTCTTGCTGATGGGAATGAGCTTTTAAGGTTCTATGGAACAACTGTGTCATGTTCTCTTGGTCTCAATGGCTCTTCCAGCCTCTGCCTCTCAGAGAAATGCTGTGTTTGTAGAATAATCAGAAATGGGTTTTCTGCTAAGAAGGAGCTCAAGGGTGGAATAGGGGTTTTCACAACTTCCACAAGTGGAAGAGCTTTTGAATCTATTGAGATTGTTGAGGATGAGCCTTCAATGAGAAAAGCACTTATTGTTTGCAGAGTGATAGCTGGTAGAGTTCATAGGCCTCTGGAGAACATTCAGGAAATGGCAGGCCAAACTGGGTTTGATTCATTGGCAGGAAAAGTAGGTCTTTATTCAAATATAGAAGAGCTTTATTTGCTCAATCCTAAAGCTCTTCTTCCTTGTTTTGTGGTCATTTGCAAACCCTGA 1278 0.4249 MPTVWFSLKRSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSATPPRKSPSAFLLSEKEGSALHGGLHSSNRLSLETDFNGCSTVTCHKCGEQFSTWDSAESHHLSKHAGKNHESLCSFFHMTVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVSCSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIVEDEPSMRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0393 425 Gene3D - 206 424 - -
Sto7g0393 425 ProSitePatterns Zinc finger C2H2 type domain signature. 179 200 IPR013087 -
Sto7g0393 425 SUPERFAMILY ADP-ribosylation 216 424 - -
Sto7g0393 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 102 - -
Sto7g0393 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 102 425 - -
Sto7g0393 425 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 205 IPR013087 -
Sto7g0393 425 PANTHER - 2 102 - -
Sto7g0393 425 PANTHER - 102 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0393 Sto-Chr7 2879204 2880627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0393 1 425 C2H2 Transcription Factor Family AT5G54630 63.883 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto7g0393 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0393 - - gmx:100787790 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0393 7 2879204 2880627 Sto7g0393 7 2879204 2880627 ECH