Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0389 ATGGGTGTGGTGCTACTTCCTTCCACTTGCCTCACGCGCTTTGCACATGAGGAAGGCGTCAGCGTCACCGGTGGTCTCACCAAATCCTCGCGTATGACTCACGTGACCATCATCCGTCAAACACGCATGCCCTCACACCATCCAGGCGCTTACACAGACATTCGTTTAGGGCTTAGAATTTCGAGCAAGATTTTCTGGGTTGCCAACGAATTTTCTGCTTTGGATAGGAAGAAAATAGTTTACATGCTCGTTCCACGAGTGGATAATCACTTGATTGGTGTTTTTCTTTTCCCCAAAATCGCTTCGCAACTGTTCAGTTTCGGTGTGACTAGTGCAGGGCTACCATACACATCATCTCATCCCACTATTCCATCAGTTCCTACCAGGCTGCTTGgatcattcaaatatgacatAGGAAACTCTCCTAATTCACCCTTTTCCTCTCATTTTGATTCCGATTCTCTTTCGAATGTGAGCGATGGACAGGATCAGCACAGTTCTGGGGAGATCCTCTCTGGTCCCAGCGCTTCTTATAACAACAACTCTTCACTGGAAACCAACTATTACTTAAACAGATCAATCTCGCCCGTGAACCGTCTCCAAGACAGGCTGCATCATCTATATTCTGCTCGGACCACACTCGTACAGGATGCGAATTCTAGCCAGACAATCAGGCACGCTTTGCTGGAATTAGAGTCTGCTCTGATGGCCCctgatgatgctgatgaagtTACCACATCAAACACTTGTTTGGGTGACAACAGCAAGCCAACAACATCTGACCAAAGATATAGGCCATGGAGCCATGAGCGCCAAGGGTCACAATATATTCAAAGTCAGTCAAGTGAAGTAGCACACATAGAGAAACGTCACAAACCAATGGAGGAAGTACCATGGCTACTACAAGACTTCCCACCTAGCAATTTAAAGCAATTGCTGATTGCTTGTGCCAAAGCCCTCTCTGAGAACAACCTCAAGGTTTTTGATCAGTTGATTGAAAAGGCTAGAAGTTCTGTGTCTATCACCGGGGAGCCGATCCAGCGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCTGGGAATAGCATCTATCATGCCCTTAGATGCAGAGAGCCTGAAGGCAAAGACTTGTTGTCTTACATGCACATGTTGTATGAGATCTGCCCCTACTTGAAATTTGGATACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGAAATGAAGACCGTATTCACATCATAGACTTCCAGATTGCTCAGGGAACTCAATGGGTGACTCTCCTTCAAGCTCTTGCAGCAAGGCCTGGTGGGGCGCCCCATGTGCGAATCACAGGAATCGACGATCCGGTTTCAAAATATGCTCGTGGGGAAGGACTTGATGCTGTTGGGAGAAGACTGGCCATAATCTCACAGAAATTTGGGATCCCAGTTGAGTTTCATGGAGTTCCTGTTTTTGCTCCAGAAGTAACAAAGGACATGCTTGATGTGAGAGCAGGAGAGGCCTTGGCTGTGAACTTTCCCCTTCATCTTCATCACACAGCTGATGAGAGTGTGGATGTGAACAACCCAAGGGATGGACTTCTGAGAATGGTGAAGTCACTTTCTCCAAAAGTGACCACATTGGTGGAACAGGAATCCAACACCAACACAACACCTTTCTTCAACAGGTTCTTAGAAACCATGGATTACTACTTGGCCATGTTCGAGTCAATTGATGTCACAATGGCGAGAAATAGCAAGGAGAGGATTAACGTGGAGCAACATTGTCTGGCAAGGGACATTGTGAACGTCATTGCCTGTGAAGGGAAGGAAAGGATAGAGAGACACGAGCTGTTTGGGAAGTGGAAATCAAGGTTGACCATGGCTGGATTCCGACAATACCCTTTGAGCTCTTACGTTAATTCTGTGATTAGAAGCCTCCTAAGGTGCTATTCAGAGCATTATACATTGGTGGAGAAGGATGGGGCTATGTTGTTGGGGTGGAAACACAGAAATTTGATATCAGCTTCGGCCTGGCATTTGATGAACTGA 2049 0.4597 MGVVLLPSTCLTRFAHEEGVSVTGGLTKSSRMTHVTIIRQTRMPSHHPGAYTDIRLGLRISSKIFWVANEFSALDRKKIVYMLVPRVDNHLIGVFLFPKIASQLFSFGVTSAGLPYTSSHPTIPSVPTRLLGSFKYDIGNSPNSPFSSHFDSDSLSNVSDGQDQHSSGEILSGPSASYNNNSSLETNYYLNRSISPVNRLQDRLHHLYSARTTLVQDANSSQTIRHALLELESALMAPDDADEVTTSNTCLGDNSKPTTSDQRYRPWSHERQGSQYIQSQSSEVAHIEKRHKPMEEVPWLLQDFPPSNLKQLLIACAKALSENNLKVFDQLIEKARSSVSITGEPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPGGAPHVRITGIDDPVSKYARGEGLDAVGRRLAIISQKFGIPVEFHGVPVFAPEVTKDMLDVRAGEALAVNFPLHLHHTADESVDVNNPRDGLLRMVKSLSPKVTTLVEQESNTNTTPFFNRFLETMDYYLAMFESIDVTMARNSKERINVEQHCLARDIVNVIACEGKERIERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKHRNLISASAWHLMN 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0389 682 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 121 679 - -
Sto7g0389 682 MobiDBLite consensus disorder prediction 147 177 - -
Sto7g0389 682 Pfam GRAS domain family 309 678 IPR005202 -
Sto7g0389 682 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 679 IPR005202 -
Sto7g0389 682 MobiDBLite consensus disorder prediction 243 279 - -
Sto7g0389 682 MobiDBLite consensus disorder prediction 243 262 - -
Sto7g0389 682 ProSiteProfiles GRAS family profile. 300 679 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0389 Sto-Chr7 2851886 2855369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0389 176 678 GRAS Transcription Factor Family AT5G48150 52.601 7.04e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto7g0389 GRAS 1.1e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0389 - - gmx:100775665 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0389 7 2851886 2855369 Sto4g0036 4 335698 342283 CCT
Sto7g0389 7 2851886 2855369 Sto7g0389 7 2851886 2855369 ECH