Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0367 ATGGCGGTGAGAGTAGCAGTGGCCACTCATCGTGGTTTCAGACGGCTTTTCGGCACCGATGCAACTTCAACTTCATCCATTCTTCCTCCGGCTTTAGAAAAGCGAAAGCCCAGCAAAAGCCTCTTAGTCGCTGGGTTTAGCAAACGTACCACTGCAGAAAGGCTTCGGGAAGCATTTTCCCAGTTTGGTGAAGTTGTTCACGCTAGGGTGATGACGGATAGACTATCAGGTGTCTCTAAAGGATTTGGTTTTGTGAAATATACTACTAAAGAAGAGGCTGCAAAGGGCATTAAAGGCATGGATGGAAAGTATGCAAGAAATAGACAACAACCTGTAAACTGCCACAAGCCAGAAGGATTTAAGCAAGaacacaaaaataataaatcttttAAGGACAGAAACAGACAGGTTAGCCTTCTTTTGTTTCGCGGCTCACTGTTTCTTATGTATTCCTTGTATGTAAGGACCAGAGTGGTTCATCTTCTTGTATGA 492 0.4289 MAVRVAVATHRGFRRLFGTDATSTSSILPPALEKRKPSKSLLVAGFSKRTTAERLREAFSQFGEVVHARVMTDRLSGVSKGFGFVKYTTKEEAAKGIKGMDGKYARNRQQPVNCHKPEGFKQEHKNNKSFKDRNRQVSLLLFRGSLFLMYSLYVRTRVVHLLV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0367 163 Gene3D - 29 138 IPR012677 -
Sto7g0367 163 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 109 IPR000504 GO:0003723
Sto7g0367 163 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 105 - -
Sto7g0367 163 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Sto7g0367 163 SMART rrm1_1 40 115 IPR000504 GO:0003723
Sto7g0367 163 PANTHER TRANSFORMER-2-RELATED 1 105 - -
Sto7g0367 163 SUPERFAMILY RNA-binding domain, RBD 35 122 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0367 Sto-Chr7 2644571 2647447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0367 40 109 Eukaryotic Initiation Factors Gene Family AT1G49760 34.286 1.08e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0367 - - qsu:112025589 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0367 7 2644571 2647447 Sto7g0367 7 2644571 2647447 ECH