Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0353 ATGGCAGATGATCAATTTCAAGCCACTGGAAACTGGTGGGAGTCGGCTCGCAACGCCGCCAGGTTCGAAGCCGAGGCGTCGCAGTCGTCTTCCTCTGCTCTGACCACCATCCCCAAGGCTCAGGCTCATGACCTGAAGCCGAGGCCTTCAGCTTGTGCCGCCGCCGACCCCAACTTGCACATGATGGGCCTGGGCCTCTCGTCGCAGCCCATGGATTGGAATCAACCCTCCTTTCTCCGAGGGGATCATGAGAAAGGAGGAGGGGAGAGCAGTTTGTTGAACCCAGCGGAAGTAGTAGAATGGAGGGAGAAGCTGTTTTCAGCAGAATCATCGTCTTCAACCACAGAGTTCAAACAAGTGAACAGAGGTTTCTCTTTGGATCAACATCAGTTTAGCCCTCAGTACAGCTCAGGGGATAGTACtactcataataataataataataataataacaatagcaCTAATGTTACAACAAGCCAAGCAAGTAATAATTTTCAGATGGAGTTGTATGGGAACAACTCCATATTACAAGGACTATTAGCAGTAGCACCACccgatcatcatcatcatcatgctgCTGCTTCGTTTGATCATCATCATCGGCAAATGAATTTTGGATTCCCATCATCAAGCTACGGAGGATTGAGCTCTAGTAATGATCAGTTAATGCCTCCAGCTGCAtggtcctcctcctcctcctctaaaGTTCCTCCCTTTCTCAGAGCTTCGCCTCCAAAACCACCCTCACCACACACTCAGTTGCATTTTGCTAACAACGCACCCTTTTGGAATGCCACTTCTCATGAGCCGCCTCCCAATATCAAAGATGTTAGATCTAACTTCTTCCCCTCCTTGCAACCCCCATTCCCCGCTCCTAATAATTTTGATGTCCAACCAAAGAATATGTGTGAAGTGAGGGAGTCGGCGGGTGGTGTGGTGAAGAAAAGTGGGAGTGAGGGTGCACCCAAAAGGCCTCGTAGCGAAACACCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAGGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCGCCTTTCGGAAAGACGGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACTgTCCTCAGCACGCCCTATATGAAGAGTGGAGCTCCCATACAGCATCAAcagagTCCTGGAAAATCTAAGGAGGGGGAGGGTACAAAACAAGATCTGAGAAGCAGAGGGCTGTGTTTGGTGCCGGTGTCGAGTACATTTCCGGTGACACATGAAACGACGGTGGATTTTTGGACACCAACATTCGGAGGAACTTTCAGATAA 1344 0.4606 MADDQFQATGNWWESARNAARFEAEASQSSSSALTTIPKAQAHDLKPRPSACAAADPNLHMMGLGLSSQPMDWNQPSFLRGDHEKGGGESSLLNPAEVVEWREKLFSAESSSSTTEFKQVNRGFSLDQHQFSPQYSSGDSTTHNNNNNNNNNSTNVTTSQASNNFQMELYGNNSILQGLLAVAPPDHHHHHAAASFDHHHRQMNFGFPSSSYGGLSSSNDQLMPPAAWSSSSSSKVPPFLRASPPKPPSPHTQLHFANNAPFWNATSHEPPPNIKDVRSNFFPSLQPPFPAPNNFDVQPKNMCEVRESAGGVVKKSGSEGAPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGEGTKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0353 447 MobiDBLite consensus disorder prediction 309 336 - -
Sto7g0353 447 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 96 436 - -
Sto7g0353 447 MobiDBLite consensus disorder prediction 129 158 - -
Sto7g0353 447 SMART finulus 338 382 IPR011598 GO:0046983
Sto7g0353 447 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 394 IPR036638 GO:0046983
Sto7g0353 447 CDD bHLH_AtbHLH_like 333 384 IPR045239 -
Sto7g0353 447 MobiDBLite consensus disorder prediction 391 413 - -
Sto7g0353 447 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 327 376 IPR011598 GO:0046983
Sto7g0353 447 Gene3D - 337 397 IPR036638 GO:0046983
Sto7g0353 447 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 96 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0353 Sto-Chr7 2536284 2538369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0353 121 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.563 1.87e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0353 - - gmx:100796549 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0353 7 2536284 2538369 Sto7g0353 7 2536284 2538369 ECH