Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0350 ATGGCCATACTGCCTCTCATCCAACTTCTTTTATTCTTGTCTCCCTTTTCCTCTGCATCCAACGTAAACACCATTACCCTGTCTCAACCACTTGAAGATGGTGCTACCTTGGTTTCCCCTAATGGAACCTACGAATTGGGTTTCTTCACTCCAGGAAATTCTCCAAACCGTTACGTTGGAATCTGGTACAAAAACATTCCACTCACAACCGTCGTTTGGGTTGCCAACCGCCACAACCCATCCAAACCCAACTCCAGCACGCTCACCATAGACACACAAGGCAACCTCGTCCTTCTCACCCACAACCACACCGTTCTCTGGTCCACAAACTCCACACAGAAAGCCTCAGCCCCCATTGTGCACCTCCTGGATTCTGGGAATTTAGTACTCAGAGACAACGATGATCCTCAAAATCAAAACTTTTTGTGGCAGAGCTTCGACTATCCTTCAGACACATTGCTTCCCGGAATGAAACTAGGATGGGACCTAAAAAGAGGCCTTAATCGGCGTCTAATTGCGTGGAAGAATTGGGACGACCCTTCACCGGGAGACTTCACGTGGAGTTTCGTACTTACCAATAACCCCGAAATGGTCCTATGGAAGGGCGAAACAGAGTACTACAGAGGAGGCCCCTGGAATGGGATTCAATTCAGTGCAGCACCGTCTCTGAAGTACGACCCAGCTTTTAGCTTCAAGTTCGTGTCCAATAATGAAGAGTTGTATTACACGTACAGCCTCAACAACCAATCAGTAATCTCTAGGCTTGTCATGAATCAAACAAGTTATGAGCGTCAGAGATACACGTGGATAGGAGAAGCCAAAGCTTGGAGGAAGTATTCCTCTGTTCCGAGAGATTACTGTGATAGCTATAATCTTTGTGGTTCGTTTGGGAGTTGTGCGATGGGTCAGTCACCGGTGTGCCAGTGTTTGCGAGGATTCGAGCCCAAATCGGCACAGAACTGGATAGCGATGGATTGGAGTGAAGGATGTGTTCGAAGTGGGAATTGGAGCTGTGGGGAGAAAGATAAAGATGGGTTTTTGAGATTTAGTAACTTGAAAGCACCTGATACGAAAAGGTCTTGGGTTAATGGAAGCATGACGCTTGAGGAATGCAGGATTAAATGCTTGGGAGATTGTAATTGCTCGGCTTATGCGAACTCAGATATAAGAGGAGATGGTAGTGGTTGTGCTATTTGGTTCGATGAACTAATTGATGTGAGACGGATTCCAGAAGCAGggcaagatatatatatcagattgGCTACGTCAGAAATAGATGAAGAAGGTGGTAATAAGAAAGTGGTGGCTGTGGTGCTCGCAACTATCGTTCCATTTGTTTTTGTGATGCTTCTAACTTTTGCTTACATTTACCGAAGAAATAGAAGAAGAATTAGAGGCGATCAAATAGATTTGGAGCTGCCTTTTTATGAACTTGCTACCATAGCTAGTGCAACCAATGACTTCTCAAGTGACAACAAGCTCGGAGAAGGTGGTTTTGGGCCTGTATACAGGGGAATATTGCAAGATGGACAAGAGATAGCAGTAAAAAGGCTTTCACAAAGATCTGGACAAGGATTGAACGAATTCAAGAATGAAGTTATATTGTGTGCCAAACTTCAACACCGAAATCTTGTTAAAGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAATTGCTCATCTATGAATACATGCCCAACAAAAGCcttgatttctttctttttgATGATAGGCCAACTATGGCATCTGTGGTTGTGATGTTGAGCAGCGAGTGTGACATGCCTCAGCCAAAGGAGCCTAGTTTTTTAATGGAAAAGGTCTCTGCATTTGAAGAACAGTTTTCTTCTGGCAAGCAACAATCTTCTTCAATCAATGAAGCATCTATCTCATTGTTAGAGGCTAGATAG 1905 0.4352 MAILPLIQLLLFLSPFSSASNVNTITLSQPLEDGATLVSPNGTYELGFFTPGNSPNRYVGIWYKNIPLTTVVWVANRHNPSKPNSSTLTIDTQGNLVLLTHNHTVLWSTNSTQKASAPIVHLLDSGNLVLRDNDDPQNQNFLWQSFDYPSDTLLPGMKLGWDLKRGLNRRLIAWKNWDDPSPGDFTWSFVLTNNPEMVLWKGETEYYRGGPWNGIQFSAAPSLKYDPAFSFKFVSNNEELYYTYSLNNQSVISRLVMNQTSYERQRYTWIGEAKAWRKYSSVPRDYCDSYNLCGSFGSCAMGQSPVCQCLRGFEPKSAQNWIAMDWSEGCVRSGNWSCGEKDKDGFLRFSNLKAPDTKRSWVNGSMTLEECRIKCLGDCNCSAYANSDIRGDGSGCAIWFDELIDVRRIPEAGQDIYIRLATSEIDEEGGNKKVVAVVLATIVPFVFVMLLTFAYIYRRNRRRIRGDQIDLELPFYELATIASATNDFSSDNKLGEGGFGPVYRGILQDGQEIAVKRLSQRSGQGLNEFKNEVILCAKLQHRNLVKVLGCCIQGEEKLLIYEYMPNKSLDFFLFDDRPTMASVVVMLSSECDMPQPKEPSFLMEKVSAFEEQFSSGKQQSSSINEASISLLEAR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0350 634 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Sto7g0350 634 SMART blect_4 28 149 IPR001480 -
Sto7g0350 634 PANTHER - 575 631 - -
Sto7g0350 634 PANTHER - 22 576 - -
Sto7g0350 634 CDD B_lectin 28 149 IPR001480 -
Sto7g0350 634 MobiDBLite consensus disorder prediction 613 634 - -
Sto7g0350 634 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 575 631 - -
Sto7g0350 634 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 576 - -
Sto7g0350 634 Pfam Protein tyrosine and serine/threonine kinase 491 585 IPR001245 GO:0004672|GO:0006468
Sto7g0350 634 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Sto7g0350 634 Gene3D Phosphorylase Kinase; domain 1 456 563 - -
Sto7g0350 634 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Sto7g0350 634 Pfam PAN-like domain 338 406 IPR003609 -
Sto7g0350 634 Gene3D - 18 146 IPR036426 -
Sto7g0350 634 MobiDBLite consensus disorder prediction 613 628 - -
Sto7g0350 634 Pfam Domain of unknown function (DUF3403) 588 634 IPR021820 GO:0004674
Sto7g0350 634 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Sto7g0350 634 SMART tyrkin_6 488 630 IPR020635 GO:0004713|GO:0006468
Sto7g0350 634 CDD PAN_AP_plant 337 421 - -
Sto7g0350 634 ProSiteProfiles Protein kinase domain profile. 488 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0350 634 SUPERFAMILY Protein kinase-like (PK-like) 472 583 IPR011009 -
Sto7g0350 634 Pfam D-mannose binding lectin 70 175 IPR001480 -
Sto7g0350 634 SMART ntp_6 341 420 IPR003609 -
Sto7g0350 634 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0350 Sto-Chr7 2515102 2518691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0350 434 575 Receptor kinase-like Gene Family AT4G23190 48.980 1.15e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto7g0350 PK_Tyr_Ser-Thr 2.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0350 - - gsj:114378841 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0350 7 2515102 2518691 Sto7g0350 7 2515102 2518691 ECH