Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0340 ATGGCATCTCAAAACCCACAAGACAATTTCCAAGATTACTTGCCTTTTATGGTCGGCAAGCTGGGTGGAGACGGTTTAATTGACGAACTGTGTAATGGGTTTAATCTATTAATGGATTCTGAAAAAGGGGTCATCACGTTCGATAGCCTCAAGAGGAATTCCGCTTTTCTAGGGCTACAGGGTTTCTCTGATGAGGATCTTCGCTCTATGTTGAGACAAGGTGACTTCGACGGTGATGGAGCTTTGAATCAGTTGGAGTTCTGCGTCTTGATGTTCAGATTAAGCCCCGAACTTATGGAAGGCTCAAAATTGTGTTCAAGTGCAGCTGACTACGTAGCCCAATTTCAGTCAATTCCTGAAGGTAAGACCTTAGTTTCTGAAGATGGAAGTTTTGAATTGGGTTTCTTCAGTCCAGGTAGTTCTTCTGCAGACCGTTACTTGGGAATATGGTACAAAAATAtcccagttagaactgttgtcTGGGTTGCCAATAGAATCAGCCCAATCAAAGACAAATCTGGCATGTTGAGTATAGACAGAGAGGGAAACCTTGTACTTCTCAGCCATAACGAGACTGTTGTTTGGTCAGCAAACCCCAGAAGAAAGGCTTTGAGCCCAATTGTTCAGCTTTTAGATTCTGGCAATCTAGTACTAAGAGATGAGAATGACAAGAATCCAGAAAATTTCTTGTGGCAGAGCTTTGACTATCCTGGTGACACATTGTTACCAGGAATGAAACTGGGATGGGATCTAAAGACTGGTCTGAACTGGACTGTTTCTGCTTGGAAGAACTGGGATGACCCTTCTCCAGGAGACTTCTCTTGGAGTCTTGTAATCAACGGCTATCCTCAACTTGTGATGTGGAAGGGCTCATCAGAGTACTACAGAAGTGGCCCCTGGAATGGCCTTCAGTTTGATGGTGCCCCAGAATTAAAGAATAATCCTCTCTTCAAGTTCAAGTTTGTGTCGACTGAGGATCAGTTGTATTACACATACAACCTCACAAATAAGTCAGTGATTACCAGAATAGTTATGAACCAAACCATTTTTACGCGGCAGCGATACGTATGGATTGAAGAAGCTCAAAGTTGGAGGCTTTATGCTTCTGTACCTAGAGACAACTGTGACAACTTTAATCTCTGTGGCCCTTATGGAAATTGTGTCATGGGTGAGTCTCCAGTCTGCCAGTGTTTAACTGGGTTTGAGCCAAAATCACCACAAAACTGGGATTTGATGGATTGGACACAAGGATGTGTACGCAGTGAACAATTGAGTTGCCATGACAAGAATGAAGTTGGATTTGTGAGGTTTAGTGGGCTGAAATATCCAGCTTCTTCACATTCTTGGGTTAATGAGAGTATGAATCTACAAGAATGTAGGGACAAGTGCTTGGGAAATTGTACCTGTACAGCTTATGCAAACTCAGATATCAGAGGAGGAGGTAGTGGATGTATGTTGTGGTTTGGTGACCTCATGGATATCAGAGAGATTTCTGGTGATAATCGGGATCTATATATACGAATGAAAACTTCTAATATAGCTGTGAAAGATGAACATAAGAAGAAGGTGACAGCAATAATCGTAATTGTTGTCTCAGTAGTTGTGATCATTTTGATTTTCTCCTACATTGGCAAGAGCATGAAACAATTGAGAGAGGAAACAAAGAAAAACTTGATGGCACAGAATAATGATGAGGGTGAGCAAGAAGATTTGGAGCTTCCTTTACTTGACCTTGCCACAATTGTGAAAGCAACTGAAGACTTCTCAATTAACAAGAAGCTTGGACAAGGTGGATTTGGGGCTGTATACAGGggTACACTAGTGGATGGAAGAGAAATTGCAGTGAAGAGGCTTTCACAGTGTTCTGGACAGGGGGTGAATGAATTTAAGAATGAAGTAATATTGATTTCCAAGCTTCAGCATCGAAATCTTGTTAAGCTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTTGTCTATGAATACCTCCCCAACAGAAGCCTAGACTTCTTTATCTTTGAAGCATTGCGTTGCATCCATATAAGTCTTCTATGTGTCCAACAGCATCCAGAGGATAGACCAAGTATGTCAACTGTGGCTGTCATGTTGAGCAGTGAGAGTGCCTTGCCTGAACCAATGGAACCTGCTTACATTATAGAGAAGACAATTGTTGAAGCAGATTCTTCTACCAAGCATCTGCTTTCTTCCACTAATGAAATTAGTCTTACCATGTTGGAGCCTCGGTAG 2250 0.4147 MASQNPQDNFQDYLPFMVGKLGGDGLIDELCNGFNLLMDSEKGVITFDSLKRNSAFLGLQGFSDEDLRSMLRQGDFDGDGALNQLEFCVLMFRLSPELMEGSKLCSSAADYVAQFQSIPEGKTLVSEDGSFELGFFSPGSSSADRYLGIWYKNIPVRTVVWVANRISPIKDKSGMLSIDREGNLVLLSHNETVVWSANPRRKALSPIVQLLDSGNLVLRDENDKNPENFLWQSFDYPGDTLLPGMKLGWDLKTGLNWTVSAWKNWDDPSPGDFSWSLVINGYPQLVMWKGSSEYYRSGPWNGLQFDGAPELKNNPLFKFKFVSTEDQLYYTYNLTNKSVITRIVMNQTIFTRQRYVWIEEAQSWRLYASVPRDNCDNFNLCGPYGNCVMGESPVCQCLTGFEPKSPQNWDLMDWTQGCVRSEQLSCHDKNEVGFVRFSGLKYPASSHSWVNESMNLQECRDKCLGNCTCTAYANSDIRGGGSGCMLWFGDLMDIREISGDNRDLYIRMKTSNIAVKDEHKKKVTAIIVIVVSVVVIILIFSYIGKSMKQLREETKKNLMAQNNDEGEQEDLELPLLDLATIVKATEDFSINKKLGQGGFGAVYRGTLVDGREIAVKRLSQCSGQGVNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYLPNRSLDFFIFEALRCIHISLLCVQQHPEDRPSMSTVAVMLSSESALPEPMEPAYIIEKTIVEADSSTKHLLSSTNEISLTMLEPR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0340 749 SUPERFAMILY EF-hand 6 91 IPR011992 -
Sto7g0340 749 CDD B_lectin 116 237 IPR001480 -
Sto7g0340 749 SMART ntp_6 429 508 IPR003609 -
Sto7g0340 749 PIRSF SRK 675 749 IPR024171 GO:0004674
Sto7g0340 749 PIRSF SRK 83 678 IPR024171 GO:0004674
Sto7g0340 749 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Sto7g0340 749 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Sto7g0340 749 CDD PAN_AP_plant 423 507 - -
Sto7g0340 749 SUPERFAMILY Protein kinase-like (PK-like) 572 677 IPR011009 -
Sto7g0340 749 Gene3D - 7 107 - -
Sto7g0340 749 CDD EGF_CA 373 405 - -
Sto7g0340 749 Pfam PAN-like domain 428 494 IPR003609 -
Sto7g0340 749 ProSiteProfiles Bulb-type lectin domain profile. 109 231 IPR001480 -
Sto7g0340 749 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Sto7g0340 749 SUPERFAMILY alpha-D-mannose-specific plant lectins 159 268 IPR036426 -
Sto7g0340 749 Gene3D Phosphorylase Kinase; domain 1 546 663 - -
Sto7g0340 749 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 677 746 - -
Sto7g0340 749 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 108 677 - -
Sto7g0340 749 Pfam S-locus glycoprotein domain 295 405 IPR000858 GO:0048544
Sto7g0340 749 Pfam Protein tyrosine and serine/threonine kinase 589 674 IPR001245 GO:0004672|GO:0006468
Sto7g0340 749 ProSiteProfiles EGF-like domain profile. 371 407 IPR000742 -
Sto7g0340 749 Pfam D-mannose binding lectin 158 263 IPR001480 -
Sto7g0340 749 Gene3D - 108 234 IPR036426 -
Sto7g0340 749 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Sto7g0340 749 PANTHER - 677 746 - -
Sto7g0340 749 PANTHER - 108 677 - -
Sto7g0340 749 ProSiteProfiles Protein kinase domain profile. 588 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0340 749 SMART blect_4 115 237 IPR001480 -
Sto7g0340 749 ProSiteProfiles PAN/Apple domain profile. 426 510 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0340 Sto-Chr7 2445855 2451702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0340 4 103 EF-hand Containing Proteins AT4G27280 71.287 1.09e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto7g0340 S_locus_glycop 9.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0340 - - jre:109013535 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0340 7 2445855 2451702 Sto7g0340 7 2445855 2451702 ECH