Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0334 TTGGATTGGCCTACACGTCTTAGCATTATTAGTGGTATTGCTCGAGGGCTTTTTTATCTTCATCAAGACTCTACACTGAGAATTATTCATAGAGATTTGAAAACTAGTAATATTTTACTAGATGCAAATTTGAATCCCAAGATATCAGACTTTGGCTTGGCTCGAACATTCTTGGGGGAACAAGTTGAGGCAAACACAAACAAGGTAGCCGGAACATAG 219 0.3836 LDWPTRLSIISGIARGLFYLHQDSTLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGEQVEANTNKVAGT 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0334 72 SUPERFAMILY Protein kinase-like (PK-like) 1 72 IPR011009 -
Sto7g0334 72 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Sto7g0334 72 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 72 - -
Sto7g0334 72 Pfam Protein kinase domain 8 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0334 72 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 72 - -
Sto7g0334 72 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Sto7g0334 72 ProSiteProfiles Protein kinase domain profile. 1 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0334 Sto-Chr7 2418258 2418476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0334 1 72 Receptor kinase-like Gene Family AT4G23190 69.444 1.79e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto7g0334 Pkinase 4.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0334 - - aip:107614884 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0334 7 2418258 2418476 Sto7g0334 7 2418258 2418476 ECH