Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0323 ATGGTGGCCGCCAAGTCTCCTAATTCTAATTATGATCAAAAGAATAATGGATTGAAAAAAGGTCCATGGACTCCGGAAGAAGATCAGAAGCTCATCGACTATATTCAGAAACATGGATACGGCAAATGGCGAACCCTTCCCAAGAATGCAGgaCTCAAAAGATGCGGAAAAAGTTGCCGACTCCGCTGGACAAACTACCTTAGGCCTGATATAAAGAGAGGCAAATTCTCATTCGAAGAGGAAGAAACCATCATCCAGTTACACAGTATTTTGGGGAACAAGTGGTCTACAATTGCTGCTAGCTTGCCGGGAAGAACAGACAACGAGATCAAGAACTATTGGAATACACACATCAAGAAGAGGCTAATGAAGATGGGGATTGATCCAGTGACTCACACACCATGTTTGGATATTCAACAACTCTCCTCCATTATTCTCAATTCTTCTCAGCTTAATAACTATCCTCCTAATTCCATTGGAATAATGCCAAACACTAATATATTAAATCCAACCCTCCTAAGTTTGCTCACAGCTCTCTTATCATCACAATCGCAAAACCCAGATTTTCAAAATCCAAATTTCCACCACAACCACCTTGATGatagtaataacaataataataataattactctaccCAAAACTTCCAATTATTACCATCACAAGAAGTCCCTAATAATATTCAGGaaaaccaaatccaaaacactcactTTAGCTTCCAAAATTCTTCCCTACCAAATATTGGAGATGATCAGTGTATGAGTGTCATGGAAAATCTTGGTAACGAGGGAGGATCGATGCCGAATTTCGATCTGAGGTCGTTGTTTTCATCGTACTCGACGACGCCTTCGTCTTCTGCAAGCCCAAGCACTTTGAATTCTTCAGCATCTTCCACTACATTTGTGAATGGTACTAATACTACTACCACCAGTACTGAAGATGAAAGGGACACCTATTGCAGCAACGTGATGATGTATAACATCTCCAATGGCTTGAATGTTATTAACGAGTCTGGGTTTTTGTGA 1023 0.3851 MVAAKSPNSNYDQKNNGLKKGPWTPEEDQKLIDYIQKHGYGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSFEEEETIIQLHSILGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLMKMGIDPVTHTPCLDIQQLSSIILNSSQLNNYPPNSIGIMPNTNILNPTLLSLLTALLSSQSQNPDFQNPNFHHNHLDDSNNNNNNNYSTQNFQLLPSQEVPNNIQENQIQNTHFSFQNSSLPNIGDDQCMSVMENLGNEGGSMPNFDLRSLFSSYSTTPSSSASPSTLNSSASSTTFVNGTNTTTTSTEDERDTYCSNVMMYNISNGLNVINESGFL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0323 340 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Sto7g0323 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 326 - -
Sto7g0323 340 Gene3D - 11 73 - -
Sto7g0323 340 SUPERFAMILY Homeodomain-like 17 114 IPR009057 -
Sto7g0323 340 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Sto7g0323 340 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 14 326 - -
Sto7g0323 340 MobiDBLite consensus disorder prediction 1 24 - -
Sto7g0323 340 CDD SANT 75 118 IPR001005 -
Sto7g0323 340 Gene3D - 75 122 - -
Sto7g0323 340 CDD SANT 22 67 IPR001005 -
Sto7g0323 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Sto7g0323 340 SMART sant 19 69 IPR001005 -
Sto7g0323 340 SMART sant 72 120 IPR001005 -
Sto7g0323 340 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Sto7g0323 340 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Sto7g0323 340 MobiDBLite consensus disorder prediction 280 313 - -
Sto7g0323 340 MobiDBLite consensus disorder prediction 186 213 - -
Sto7g0323 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0323 Sto-Chr7 2287022 2288286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0323 4 340 MYB Transcription Factor Family AT4G21440 47.090 1.79e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto7g0323 Myb_DNA-binding 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0323 K09422 - gmx:100820398 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0323 7 2287022 2288286 Sto7g0323 7 2287022 2288286 ECH