Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0307 atgaaacaccggatgaagaGGAAACGACCAGCTTTGTTGACGCCGGAGTCAAAGCTATTAGTAATCATTCGAATTCAGGGaaaAAGTGACATGCATCCAAAAACACGAAAGGTCTTATACAGCTTGAGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGGCAAATGAGGGAATATTGGAGAAGCTTAAGATGGTCGAACCCTATGTTACCTATGGATATCCTAATCTTAAAAGCATAAAGGAGCTTATCTACAAGAAGGGACGTGCAAAAATTGACAAGCAGAAAGTTCCCTTGACGGACAACAACATTATTGAACAGGAATTAGGCAAGTATGGTGTTATGTGCATAGAAGACATGGTCCATGAAATTGTTAATGTTGGTAAGCACTTTAAAGAAGTTGCCAATTTCTTATGGCCCTTTGAACTCAACAAACCAGCTGAAGGCTTGCGAGGATCGAAAATCTTATACAAAGACGGAGGAGACACAGGGAACCGAGAGGATCTGATCAACGAACTCATCAATAAAATGAATTAA 537 0.3818 MKHRMKRKRPALLTPESKLLVIIRIQGKSDMHPKTRKVLYSLRLRRIFSAVFVKANEGILEKLKMVEPYVTYGYPNLKSIKELIYKKGRAKIDKQKVPLTDNNIIEQELGKYGVMCIEDMVHEIVNVGKHFKEVANFLWPFELNKPAEGLRGSKILYKDGGDTGNREDLINELINKMN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0307 178 Gene3D - 19 122 IPR036919 -
Sto7g0307 178 Gene3D - 123 178 IPR036919 -
Sto7g0307 178 CDD Ribosomal_L7_archeal_euk 19 178 IPR035808 -
Sto7g0307 178 Pfam Ribosomal protein L30p/L7e 20 70 IPR016082 -
Sto7g0307 178 PANTHER 60S RIBOSOMAL PROTEIN L7-1 1 178 - -
Sto7g0307 178 SUPERFAMILY Ribosomal protein L30p/L7e 19 178 IPR036919 -
Sto7g0307 178 PANTHER 60S RIBOSOMAL PROTEIN L7 1 178 IPR039699 -
Sto7g0307 178 TIGRFAM uL30_euk: 60S ribosomal protein uL30 1 178 IPR005998 GO:0000463|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0307 Sto-Chr7 2161717 2163081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0307 1 178 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 55.056 2.97e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0307 K02937 - gmx:100500005 280.411