Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0292 ATGGAGCAGGAGAGGGCAGACTTGGAGTCTCAAACTATGTTCTACAACAACATCAATAATCATGCTCCTGTTACTCTCAAGttcAAGGACGTGGTGTACAAAATGAAGAGCAAAAAAGGTAAAGCGGAAGAGAAAGTAATCCTAAAGCAAGTGTCGGGAATAGCAAAAGCAGGCGAAATGCTAGCAATGTTAGGTCCCTCCGGAAGCGGCAAAACGACACTCCTCACTGCGTTGGGAGGAAGACTTGGATCAGATTCAGGCCACCAAATCCTTCGTGGAACAATAACCTACAACGACCACCCCTTTAGCAACGGAATCAACACAAGATTGGGATTCGTCACGCAACACGACCTTCTCTATCCTCACCTAACCGTCACCGAGACTCTAGTCTTCACAGCCCTACTCCGCTTGCCAAACACCCTCTCCAAACACCACAAAGTGGCCCAAGCCCAGGCCCTGATATCCCACCTGGGCTTATCCAAGTGCAAGGATAGCGTGATAGCCAGGATATCAGGGGGAGAGAGGAAGAGGGTTAGTATAGGGGAAGAGTTGGTGGTGAACCCGAGCTTGTTATTTGTGGACGAGCCCACGTCGGGACTGGACTCCACCACGGCCCAGGCGATTGTGTCAACTCTGTGTGAGGTGGCTAGTGTGGGCCGGAGGACGGTGGTTATGACCATACACCAGCCTTCTCCAAGGATGTATGATATGTTTTGTAAGGTCTTGTTGCTGTGTGAAGGAAGCCCTTTGTTCTTTGGGAAGGGGTGTGATGCTCTAACCTATTTCTCAACTATAGGCTATGCCCCCAATTTGGGTATCAACCCTTCCGATTTCCTTTTGGATCTTGCAAACGGTACGTACGGTAACGGTATTTACACTGATGAGTGTTATGAAGATCATGCGTCGCTCAAGCAGAAACTGATTTCAGCATATAAGAACAACCTTGAAGCACAAGTGAAGGAATTGGTTAATGAGGAGATGAGTGAGCGTGATAGAAGCGAATTAGGCACAATATTTGAAGAGAGAGGCAGTGGTGAGAGATGGCCCACTAGTTGGTTTGAGCAATTCAGTGTGTTGCTCAAGAGAGGAGTGAAGGAGAGGAAACATGACTCATTCTCTGCCCTCAAGATTGCTCAAGTCCTTCTAGTCGCTTTTCTTTCTGGACTATTCTGGTATAAATCTCACATTTTGCACTTGCAAGATCAGATTGGGCTTATATTCTTCATAGTTGGGTTTTGGAGTTTCCTCCCACTCCACCAGGCCATCTTCACCTTCCCTCAAGAGAGGATGATgctaaagaaagaaagatgctGTGGAATGTACAGGCTCTCCTCCTACTTCTTCTCAAAGATAGTAGCAGATCTTCCAATGGAACTTATCCTTCCCACCATTTTCCTCTTCATATCCTACTTTTTGGCAGGCCTCAAACCCAATGTCCTAAATTTCTTATACACTCTCTTCACCCTCTTGCTCAATGTCCTAGTCTGCCAAGGCCTAGGCCTTGCTTTAGGTGCTATAATCATGGATCCACAATCTGCAAACACACTAGGCTCTGTGGTTATGCTAAGTTTCCTTCTAGTCTCAGGGTACTATGTCCAGCATGTGCCTAGTTTTATAGGTTGGATTAAGTACTTATCCATTATCTACTACACCTTCAAGCTGTTTGTGGGGTCTCAGTATGAGGTTGGGGACACATACCCTTGTTCTGAAGGGCAGTGTTCAGTGGTTGAGTTTCCTGCTATAAAGCAAATGGGGTTGCATTTGAAGGGCCAAGTGGTGGCTGCTTTGGCTCTAGTGATAATGCTCATAGGTTATAGACTTGTAGCTTATTTTGCTCTCATGAGAATTGGGGTCACTAAGAAATTGGTTTAG 1872 0.4578 MEQERADLESQTMFYNNINNHAPVTLKFKDVVYKMKSKKGKAEEKVILKQVSGIAKAGEMLAMLGPSGSGKTTLLTALGGRLGSDSGHQILRGTITYNDHPFSNGINTRLGFVTQHDLLYPHLTVTETLVFTALLRLPNTLSKHHKVAQAQALISHLGLSKCKDSVIARISGGERKRVSIGEELVVNPSLLFVDEPTSGLDSTTAQAIVSTLCEVASVGRRTVVMTIHQPSPRMYDMFCKVLLLCEGSPLFFGKGCDALTYFSTIGYAPNLGINPSDFLLDLANGTYGNGIYTDECYEDHASLKQKLISAYKNNLEAQVKELVNEEMSERDRSELGTIFEERGSGERWPTSWFEQFSVLLKRGVKERKHDSFSALKIAQVLLVAFLSGLFWYKSHILHLQDQIGLIFFIVGFWSFLPLHQAIFTFPQERMMLKKERCCGMYRLSSYFFSKIVADLPMELILPTIFLFISYFLAGLKPNVLNFLYTLFTLLLNVLVCQGLGLALGAIIMDPQSANTLGSVVMLSFLLVSGYYVQHVPSFIGWIKYLSIIYYTFKLFVGSQYEVGDTYPCSEGQCSVVEFPAIKQMGLHLKGQVVAALALVIMLIGYRLVAYFALMRIGVTKKLV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0292 623 Pfam ABC transporter 48 198 IPR003439 GO:0005524
Sto7g0292 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 14 617 - -
Sto7g0292 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 263 IPR027417 -
Sto7g0292 623 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Sto7g0292 623 Gene3D - 13 261 IPR027417 -
Sto7g0292 623 CDD ABCG_EPDR 23 253 - -
Sto7g0292 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 271 IPR003439 GO:0005524
Sto7g0292 623 SMART AAA_5 57 248 IPR003593 -
Sto7g0292 623 Pfam ABC-2 type transporter 354 560 IPR013525 GO:0016020|GO:0140359
Sto7g0292 623 Coils Coil 312 332 - -
Sto7g0292 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0292 Sto-Chr7 2041388 2043916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0292 57 248 Calmodulin-binding Proteins AT2G36910 26.733 2.94e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0292 K05681 - gmx:100816135 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0292 7 2041388 2043916 Sto7g0292 7 2041388 2043916 ECH