Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0269 atgggGCCTCTCTTTGTTACTTCTCCTTTTCTTTGCTATATTTTCTTCCTTGTTCTCAGTGCAGTCCCATTATTCCACGTCCAAGCCTACGCTTGGCTTAATGCTCATGCAACCTTCTATGGGGCCAATCAAGATCCCACCACATTGGGAGGAGCATGTGGTTATGATAATACGTTTCATGCCGGGTTTGGAGTGAACACAGCGGCGGTGAGCACGATGCTATTCAGAGGTGGGGAGGCGTGCGGTGCTTGCTACCAAGTGATGTGCGACTACCGGCTCGACCCCAAGTGGTGCCTCGGCCGCCGAACCGTGACGGTGACGGCCACCAACTTCTGCCCTCCCAACAACCACGGAGGGTGGTGTGACCCCCCTCACCACCACTTCGACATGTCCATGCCTTCTTTCTTTCGCATTGCACGACAAGGCAACGAAGGCATAGTCCCTGTCCTCTATAGaagGGTGGGATGCAGGAGGAGAGGGGGCGTGAGGTTCACGTTGAGGGGACAGGGGAATTTCAATATGGTGATGATATCGAACGTTGGAGGGAGTGGGGACGTGAAGAGTGTGTGGATAAAGGGTTCGAAAAGTGGAAGATGGTGGCCGATGCATAGGAATTGGGGTGCTAACTGGCAGAGCAGTATGGACCTTCGATACCAAAACCTCTCTTTCAAGCTCACTTTGTCTAATGCCAACACTTTGCTCTTTCTCAACGTCGTTCCTTCCTCTTGGAGGTTTGGACAGacattttcttcttccaatcAGTTCCTTTAA 771 0.5045 MGPLFVTSPFLCYIFFLVLSAVPLFHVQAYAWLNAHATFYGANQDPTTLGGACGYDNTFHAGFGVNTAAVSTMLFRGGEACGACYQVMCDYRLDPKWCLGRRTVTVTATNFCPPNNHGGWCDPPHHHFDMSMPSFFRIARQGNEGIVPVLYRRVGCRRRGGVRFTLRGQGNFNMVMISNVGGSGDVKSVWIKGSKSGRWWPMHRNWGANWQSSMDLRYQNLSFKLTLSNANTLLFLNVVPSSWRFGQTFSSSNQFL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0269 256 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 161 IPR007112 -
Sto7g0269 256 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 251 IPR007117 -
Sto7g0269 256 SUPERFAMILY PHL pollen allergen 158 251 IPR036749 -
Sto7g0269 256 Pfam Lytic transglycolase 67 151 IPR009009 -
Sto7g0269 256 Gene3D - 161 256 IPR036749 -
Sto7g0269 256 Gene3D - 21 157 IPR036908 -
Sto7g0269 256 SUPERFAMILY Barwin-like endoglucanases 31 179 IPR036908 -
Sto7g0269 256 Pfam Expansin C-terminal domain 162 240 IPR007117 -
Sto7g0269 256 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Sto7g0269 256 SMART dpbb_1 67 151 IPR007112 -
Sto7g0269 256 PANTHER EXPANSIN-A15 10 255 IPR002963 GO:0009664
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Sto7g0269 256 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Sto7g0269 256 PANTHER EXPANSIN-A12 10 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0269 Sto-Chr7 1892947 1895544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0269 31 251 Expansin Gene Family AT3G15370 63.347 1.58e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0269 - - gmx:100803855 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0269 7 1892947 1895544 Sto7g0269 7 1892947 1895544 ECH