Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0262 ATGAACAATATGGGTGTTGAGATCCATGACCATGATTCTGCTGACGGAAGCCATGAATACACAATCACATTGGACATTCCCACTTGCATCCTGATCGGCTTCTCCCTCACACTCTTCTTCTGCATCCTCTACCACATCCTCTACACCTTCTTCTACTGCTTCCTGGGCACGAGGATCCATTATTACTACCACCAACGCCACGGCGACATCGAGGAAGGGATGAGTATGATCACTCCGTCCGCGtcgtcatcatcttcttcttcgttgtcgtcgtcgtcgtcgtcaatTAATTACGGAGGCGAGGATGCTTCACACGTGGCGATGTTCCAGGCGGTGGTTCGGAGCAACCTGCAGGCGTGGATGATGGTGGGGGCGTTGATGGGGGAATCGGAGAATGCGGTGGAGGAGAAGAGGGGAGAGAGGCTTAGGGATTCGAAGAAGATGGGTGGTCTGGTGAAGTATGGTggtgaggaggaggaggaggattaTTGTGCGATTTGCTTGGAGGAATTGAAGGGTGGGGAGTGGTGTCAGGTTTTCCCTGTGTGCGATCATGTTTTTCATTCCGATTGTATAGATTCTTGCGAAAACGACAACGGAGGAATCCCTCCTAGGAGAACCGAAGCACCGCCGCCTCCTTTCCCTCCGAGGTTGCCCTGCATTGTCGCCATCGGAATCGTGTCGTTGATCTTCGTGGGCGCGATCCTCACTCTGTTCACCGTCGCCGCCGGCGTGTTGATCTTCGCCGGCTGCGTCTGCTGTTTCGGCGGCTCCGACGACGACGACGGCGGCGAATTCGAGATGGACGTGGAAACCGGAGGCGGATCATCAGATGAGCTGGATGAAGAACGGGCGGTGGAGATTCTGGAAGGGTTTCTGAGAGTGgtaaggagaagaggaagaggaggaggaggaaggaaacagaggaagaagaagaatgaatcGCGGAAGAAAGTGGTGGGTTCGATTGAAAGTTTCGGGAGCGAAGGAATGAGAGGGTTGGATTATAGTGAGTGTTCGATTTGCTTGGAGGAATTCCAGGGAGGGGAGAATTGTCTGGTTTTTCCAGTGTGTGGCCATGTTTTTCACTGCAAGTGTATTCTGCGTTGGATAGAGAAGAAGCTGACGTGTCCGGTTTGTCGATACTGCGTCGTATTGAAGGCGAGCAGAGACAGAGGAATGTAG 1185 0.4759 MNNMGVEIHDHDSADGSHEYTITLDIPTCILIGFSLTLFFCILYHILYTFFYCFLGTRIHYYYHQRHGDIEEGMSMITPSASSSSSSSLSSSSSSINYGGEDASHVAMFQAVVRSNLQAWMMVGALMGESENAVEEKRGERLRDSKKMGGLVKYGGEEEEEDYCAICLEELKGGEWCQVFPVCDHVFHSDCIDSCENDNGGIPPRRTEAPPPPFPPRLPCIVAIGIVSLIFVGAILTLFTVAAGVLIFAGCVCCFGGSDDDDGGEFEMDVETGGGSSDELDEERAVEILEGFLRVVRRRGRGGGGRKQRKKKNESRKKVVGSIESFGSEGMRGLDYSECSICLEEFQGGENCLVFPVCGHVFHCKCILRWIEKKLTCPVCRYCVVLKASRDRGM 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0262 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 209 IPR013083 -
Sto7g0262 394 Pfam Ring finger domain 338 381 IPR001841 -
Sto7g0262 394 ProSiteProfiles Zinc finger RING-type profile. 339 381 IPR001841 -
Sto7g0262 394 SUPERFAMILY RING/U-box 157 195 - -
Sto7g0262 394 PANTHER RING FINGER DOMAIN-CONTAINING 259 384 - -
Sto7g0262 394 PANTHER RING FINGER DOMAIN-CONTAINING 17 193 - -
Sto7g0262 394 SMART ring_2 339 380 IPR001841 -
Sto7g0262 394 SMART ring_2 164 223 IPR001841 -
Sto7g0262 394 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 193 - -
Sto7g0262 394 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 259 384 - -
Sto7g0262 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 385 IPR013083 -
Sto7g0262 394 Pfam RING-like zinc finger 164 192 IPR001841 -
Sto7g0262 394 SUPERFAMILY RING/U-box 338 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0262 Sto-Chr7 1856884 1860306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0262 285 381 C3H Transcription Factor Family AT2G17450 34.259 3.51e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0262 - - gmx:102660073 118.242