Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0252 ATGGGCTGTGTCTTTTGCAAACCATCTGCCATTGATGATAGTAATGAGAGCCCAAGGGAGCGTTTATCCAGCAAGGAATCATTGGAATCACGTGTATCTAGGGCTACTTCATCAAGGAGGGAGGAAGCATATAGAGTGAAGGATAGATATGATAGTAGTAATGGAAGAAGAACTGCCGTAATTGACAAGCAAGTTAATGGTTTGGTTCAATTGCAAGCTGTTAATTttgaaagaaagagggagaaaaTGGAACTCATTGTTGCTCAACATCCGGGAATGAGTAGTGTTCCGAAAGCCATGGAAGGGGAGCAGGTTGCAGCTGGTTGGCCTCAATGGCTGGCAGCAGTGGCAGGAGAGGCTATCAAGGGATGGTTGCCACGCCGTGCAGATTCATTTGAAAAGCTGGATAAAATTGGCCAGGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTtgaacaaaagaaaattgttgCTTTGAAGAAAGTGAGGTTTGATAATTTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGAGAAATTCACATTTTGCGTAGACTTGATCATCCAAATGTCATCAAACTGGAAGGCTTGGTTACATCAAGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCCTCGCATCCTGGACAGAAGTTTACGGAAGCACAGGTTAAATGTTACATGCAGCAACTTTTATGTGGACTTGATCATTGCCACAGCCGCGGTGTGCTGCATCGTGACATTAAGGGTTCCAACCTCTTGATTGACAACAATGGAACATTGAAGATTGCAGACTTTGGCTTGGCAAGCTTTTTTGATCCCAATCAAATTCAGCCACTTACAAGCCGAGTTGTCACTCTCTGGTATCGACCACCAGAGCTTTTACTAGGAGCCATTTACTATAGTACTGCAGTAGATTTATGGAGTACAGGTTGCATTCTTGCTGAGCTGTATGCTGGCAAGCCTATTATGCCTGGAAGAACTGAGGTTGAGCAATTACATAAGATTTTTAAACTTTGTGGTTCACCTTCTGAGGATTATTGGAGAAAATCAAAGTTACCTCATGCAACAATATTTAAGCCCCAACAACCTTATAAGCGGTGTGTTGGAGAAACATTTAAGGACTTTCCTGTGCCTGCATTAGAACTCATGGAGACACTTTTGTCCATAGATCCTGCTGATCGTGGAACTGCAGCATCTGCATTGAAAAGTGAGTTCTTCACAACAAAACCACTACCTTGTGATCCTTCGAGCTTGCCAAAGTATCCTCCTAGCAAAGAACTTGATGTGAAACTACGGGATGAAGAAGCTCGAAGACAAGGAGCAGCAGGAAGCAAGGGCCAGAGACATGACCTTGAGAGAAGAGGAACCAGAGAATCTCGAGCCATCCCTGCACCTGATGCTAATGCTGAATTGGTCCTGTCATTGCAGAAGAGACAAGGTCAACCCAATTCCAAGAGCCGGAGCGAGAAGTTTAACCCTCATCCTGAAGAAGTGGCTTCAGGATTTCCCATTGATCCTCCTAGGCCATCTCAAGTTGTAGATCCTCAGGTGCAGCAACATAAAAGAGCCTCCCATTCAGGTCCACTGGCTCATCATACTGCTTGGGTGAAAGCTGGGAAGAATCAGGATGATCCTACAAAGATTTCAGTGGGTGGTGACATATCGACAATGTCAGGCTTAGTTGCAGCGAGAAAGAGTATGTTGTCCGATGATCGCCGAGAAAAGTCGAGATCATCACAAGTGGAGTCTCCAAGACTGATTAGTAGGTTCCCAGGATCCTTCAAGGAGGCCTCTGAATCATTGATACTACAGGATCAAAAGCATCACACACAAGGCCCTGTGGATCCTCCTCAAAAAGAAGAGAGGAGAGTCAGCAACAAAGATCCAATACTTGTTGGTTACGGATCGAAGGGTAATAAAATTCATTATTCTGGTCCATTGCTAGTTCCATCGAGCAACACGGATCAGATGATGAAGGACCATGATCGTCACATCCAAGAAGCTGTTCGGCGAGCACGAATGGACAAGGCAAAGATGAGAAGACTTCAAGCTGAAGCTGTAAAATACTGTGGGACGTTGTCCTCTTTCGTTATATTCACTCTGAAGATGCCTAGATGCTTCAAGGAATTGACTATGTTCTGGAGGAATTTGAAGTAA 2187 0.4385 MGCVFCKPSAIDDSNESPRERLSSKESLESRVSRATSSRREEAYRVKDRYDSSNGRRTAVIDKQVNGLVQLQAVNFERKREKMELIVAQHPGMSSVPKAMEGEQVAAGWPQWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNFEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGQKFTEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGTLKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGAIYYSTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCVGETFKDFPVPALELMETLLSIDPADRGTAASALKSEFFTTKPLPCDPSSLPKYPPSKELDVKLRDEEARRQGAAGSKGQRHDLERRGTRESRAIPAPDANAELVLSLQKRQGQPNSKSRSEKFNPHPEEVASGFPIDPPRPSQVVDPQVQQHKRASHSGPLAHHTAWVKAGKNQDDPTKISVGGDISTMSGLVAARKSMLSDDRREKSRSSQVESPRLISRFPGSFKEASESLILQDQKHHTQGPVDPPQKEERRVSNKDPILVGYGSKGNKIHYSGPLLVPSSNTDQMMKDHDRHIQEAVRRARMDKAKMRRLQAEAVKYCGTLSSFVIFTLKMPRCFKELTMFWRNLK 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0252 728 MobiDBLite consensus disorder prediction 13 42 - -
Sto7g0252 728 PANTHER CYCLIN-DEPENDENT KINASE 1 691 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 615 637 - -
Sto7g0252 728 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0252 728 MobiDBLite consensus disorder prediction 576 590 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 445 470 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 575 600 - -
Sto7g0252 728 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Sto7g0252 728 Coils Coil 675 695 - -
Sto7g0252 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Sto7g0252 728 MobiDBLite consensus disorder prediction 484 498 - -
Sto7g0252 728 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 7 42 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 622 637 - -
Sto7g0252 728 CDD STKc_CDK9_like 132 416 - -
Sto7g0252 728 MobiDBLite consensus disorder prediction 445 539 - -
Sto7g0252 728 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0252 728 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0252 728 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Sto7g0252 728 PANTHER CELL DIVISION PROTEIN KINASE 1 691 - -
Sto7g0252 728 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0252 Sto-Chr7 1798600 1804912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0252 124 473 Core Cell Cycle Gene Families AT5G10270 51.639 5.03e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto7g0252 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0252 - - gmx:100792173 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0252 7 1798600 1804912 Sto7g0252 7 1798600 1804912 ECH