Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0226 ATGGACAGCTACTATCCCTTTGATCATCACACTAGCAGTGATGCTCATTTGCCTCCTGGGTTTCGCTTCCACCCCACAGACGAGGAGCTCATCACTTTCTACCTCCTGAAGAAGGTTCTGGACAGCAGCTTCACTGGAAGAGCCATTGCTGAAGTTGACCTCAACAAGTGTGAGCCATGGGAGCTCCCAGAGAAAGCTAAAATGGGAGAGAAGGAGTGGTACTTCTTCAGCCTACGAGACCGAAAGTACCCAACTGGGCTACGCACTAATAGGGCTACAGAAGCTGGGTACTGGAAAGCCACTGGGAAAGACAGAGAGATTTACAGTTCAAAAACTTGCTCTCTCGTAGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAGAGCTCCCAAAGGAGAGAAGAGCAATTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCATTACCTCTCACGCACCTCCAAGGATGAGTGGGTCATATCTCGTGTCTTCCAGAAGAGCATCTCCGCCACCGTGTCTTCTAATTCTGCCACTGCGGCCTCCAAGAAGATGATCCCCAGAATGAGCTCTTCTGTTGGTATGAGTCTCTACCCGGAACCAAATTCTCCTTCCTCTGTCTACCTCCCTCCTCTGCTCGACTCCTCTCCTTACCCCACCACCGTCGCCGCCGCCTCCAACGACCGTGACAGCTGCTCTTACGACGGCAGCAGCACCACACCAAGGGAGCACGTGTCCTGTTTCTCCACTTTCTCTGCTGCCAATAATGGAAGCTTCGATCTTCCTCCACCGCCGTCTGACCCTTTTGCTCGGTTCCAGAGGAACGTTGTTGGAGTCTCTGCCTTCCCGAGTTTGAGGACTCTGCAGGACAATCTCCATCtgcctttcttcttctctcccgccgccgccgccgtccaTGGTGGTGACATGAATGGAATTGCGGCTGTGGCGGAGGAGGAGCAGAGAGTGGTGGCGGACGGTGGTGGCATGGCGGCATTGTGTCCCTCGGAGCTTGACTACATGTGGGGATACTAG 1041 0.5101 MDSYYPFDHHTSSDAHLPPGFRFHPTDEELITFYLLKKVLDSSFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRTSKDEWVISRVFQKSISATVSSNSATAASKKMIPRMSSSVGMSLYPEPNSPSSVYLPPLLDSSPYPTTVAAASNDRDSCSYDGSSTTPREHVSCFSTFSAANNGSFDLPPPPSDPFARFQRNVVGVSAFPSLRTLQDNLHLPFFFSPAAAAVHGGDMNGIAAVAEEEQRVVADGGGMAALCPSELDYMWGY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0226 346 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Sto7g0226 346 ProSiteProfiles NAC domain profile. 17 169 IPR003441 GO:0003677|GO:0006355
Sto7g0226 346 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Sto7g0226 346 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
Sto7g0226 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 312 - -
Sto7g0226 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 12 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0226 Sto-Chr7 1619705 1621378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0226 4 346 NAC Transcription Factor Family AT5G53950 55.385 9.14e-117 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0226 NAM 1.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0226 - - gmx:100788671 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0226 7 1619705 1621378 Sto7g0226 7 1619705 1621378 ECH