Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0200 ATGGGGGAATCAGAAACCCATCAGCGACCAACAACGACGTCGTCGAGATTGGGGATAAGGGGCGGAATCGGAGAGATCGTGGAGGGACCAAGAGATCGCAGAGTTCGTCTCTCCGCTCACACAGCCATCCAATTCTACGACGTACAGGACCGACTAGGCTACGATCGACCCAGCAAAGCCGTCGATTGGCTCATCAAGAAGGCCAAGGCCGCCATAGACGAGCTTGCGGAGCTTCCCGCATGGAACCCCAATACTTCCGCAATCTACACAAATTCTCAGCAGATGAGCGAGGACAACGAAGCCGAAAACTCCATTGGCGTCCACCGCCCGCCGGTGGATGCAATTGAAGAACATGGCCGTTTGCTTCGAATGGTAGCTTGGAATGCTGCTGCTGGTGCCGATACTGGTAATAATAGTGGCCACGGCGGCGGAGGATTCATCTTCAACTCGCCGTCTCCGGCGAATTTGCAGTTTCCGCCGACGCCGTTGTTCGGCCATAGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCACACGAATCCAGGGTGAGGAGGAACACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 612 0.5588 MGESETHQRPTTTSSRLGIRGGIGEIVEGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWNPNTSAIYTNSQQMSEDNEAENSIGVHRPPVDAIEEHGRLLRMVAWNAAAGADTGNNSGHGGGGFIFNSPSPANLQFPPTPLFGHSQYLSQRGPLQSTRIQGEEEHDGVSDKPSSASSDSRH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4 28 104 - -
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4 179 203 - -
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4 116 179 - -
Sto7g0200 203 MobiDBLite consensus disorder prediction 157 203 - -
Sto7g0200 203 ProSiteProfiles TCP domain profile. 19 75 IPR017887 -
Sto7g0200 203 Pfam TCP family transcription factor 28 104 IPR017887 -
Sto7g0200 203 MobiDBLite consensus disorder prediction 161 179 - -
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 104 IPR005333 GO:0003700
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 179 203 IPR005333 GO:0003700
Sto7g0200 203 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 116 179 IPR005333 GO:0003700
Sto7g0200 203 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0200 Sto-Chr7 1470155 1471468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0200 1 83 TCP Transcription Factor Family AT3G15030 56.757 1.17e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto7g0200 TCP 7.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0200 - - jre:109012585 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0200 7 1470155 1471468 Sto4g2806 4 28911671 28912807 ECH
Sto7g0480 7 3542715 3543626 Sto7g0200 7 1470155 1471468 ECH
Sto7g0200 7 1470155 1471468 Sto7g0200 7 1470155 1471468 ECH