Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0194 ATGATCAACGGTGGATTGTGCAGTCTCCGCACGTGTGGCTCGCGTCTCCCTTGCTTCCCGGACACACAACCTTTACTCCGAGCAGCCACCGCGTCCTCCGTCTCCGGAGccaataagaagaagaaggagaccaAAGAGAAGGTCATAGTCATTTCTGGTCCCACAGGGTCTGGTAAAAGCCGCCTTGCAATGGAGCTCGCCAAGCGCCTTAACGGCGAAATTGTTAGTGCGGACTCTGTCCAGGTATACCAGGGTCTTGATATTGGATCAGCAAAGCCCTCCCTAAATGATAGAAAGGAGGTACCGCATCATCTGGTTGATATATTGCACCCATCCGAAGATTATTCTGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGGTGCATTCTTGACAATGGTCGTGTTCCTATAGTTGTTGGGGGAACTGGGTTGTATTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAAGCGTCTCCAGAGACTACATCTGAAGTGTATTCAGAGTTAGCTGAATTACAGAGAAATGAAGACTGGGATACAGCGGTGCAGTTGGTTGTAAAAGCAGGTGACCCAAAAGCCCAGTTTATAACTCCCAATGATTGGTACCGATTGCGACGTAGCCTTGAGATTGTCAAGTCTAGTGGATCACCTCCATCTGCTTTTCGGGTACCATACGATTCTTACAGGGAACAGGGAGATTCTAGTTCAGTGGACAATTCTGAGTCTTCTGATGTCAATGCTATTGGTGACGGAATGAAAGAATCATCCTCAAATTTGGATTACGAGTTCGtttgttttttcctttctaGTCAAAGACTTGACCTCTACAGATTAATTGACTATCGCTGTGAAGATATGCTGTTAGAAAGGGACGGGATATTGTCTGAGGCTCAATGGCTTCTTAATATAGGTcttcttccaaattcaaattctgCAACTAAAGCAATTGGTTACAGGCAGGCCATGGAGTACTTACTAAAATGCAGACAGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCAGTTTTTTATCTGAATTTCAAAAGGCATCTAGGAATTTTGCCAAAAGACAATTGACATGGTTTCGAAATGAAGATATATACCACTGGCTTGATGCTTCTAAACCTCTGGTATATTGA 1152 0.4245 MINGGLCSLRTCGSRLPCFPDTQPLLRAATASSVSGANKKKKETKEKVIVISGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPETTSEVYSELAELQRNEDWDTAVQLVVKAGDPKAQFITPNDWYRLRRSLEIVKSSGSPPSAFRVPYDSYREQGDSSSVDNSESSDVNAIGDGMKESSSNLDYEFVCFFLSSQRLDLYRLIDYRCEDMLLERDGILSEAQWLLNIGLLPNSNSATKAIGYRQAMEYLLKCRQQGGQSSVREFFSFLSEFQKASRNFAKRQLTWFRNEDIYHWLDASKPLVY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0194 383 CDD AAA 49 132 - -
Sto7g0194 383 Gene3D - 157 227 - -
Sto7g0194 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 177 IPR027417 -
Sto7g0194 383 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 381 IPR039657 -
Sto7g0194 383 Gene3D - 45 381 IPR027417 -
Sto7g0194 383 TIGRFAM miaA: tRNA dimethylallyltransferase 48 225 IPR018022 GO:0008033
Sto7g0194 383 Hamap tRNA dimethylallyltransferase [miaA]. 48 379 IPR018022 GO:0008033
Sto7g0194 383 Pfam IPP transferase 81 369 - -
Sto7g0194 383 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 37 381 - -
Sto7g0194 383 MobiDBLite consensus disorder prediction 217 252 - -
Sto7g0194 383 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0194 Sto-Chr7 1423421 1428147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0194 51 348 C2H2 Transcription Factor Family AT2G27760 26.837 1.52e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0194 K00791 - gmx:100808814 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0194 7 1423421 1428147 Sto7g0194 7 1423421 1428147 ECH