Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0189 ATGGGATCACCATTCAAGCCAATTTCATGTCCCAGAAAAACCCCATATAGAATAGAGACCAAGAATTTGTCATACAGGTTGTGTAGGCAGATTGATGGACTCACAAGTAGTCTTTGCTTTTGTTCAAATTGTCCAAGGAGGAGTGGTAAGTTGATTTTGAAAGATGTGAATTGTGAGGCAAGACCTGGGGAGCTTACTGCTATTGCTGGGCCTAGTGGAGCTGGAAAAACCACACTGCTAGAGATTCTTGCTGGGAGAGTATACCCGTGTGAGGTTTCGGGGCAAGTTCTTGTCAATCATAGGCCGATGGACTCGAATCGGTTTAGAAGAACATCGGGGTATGTCACACAAGAAGATACCTTGTTCCCTTCACTTACAGTTAGAGAAACACTCATGTACAGTGCACTTCTGAGGCTTCCTGGTGGGAGAAAAGTGGCTGCTGCTAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGATCAGATTGCAGATTCAAgaattggtggtggtggtggatccAACCATGGGATATCGGGTGGAGAAAGGCGAAGAGTTTCGATTGGAGTTGATTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCTCTGAACATAGTCTCATTGCTTAGACTAATGGCATTTAACCAAGCTAGGCTCAAGATAGCCGGGCATTGCATTCCTCTCCATGTAAATGTCCTCGAATTCGCCCTTGATGTTTTGGAGAGCCTAGTAATACAAACCACAGAATCTGTGAACAACCAGTTTCTTCTTAGGGACAAAGAGGAACAAGTTTGTAAAGCAAGGATGCAGTACTCTATGAATGTCAAAGAAAAGGCTCTTCAATACCCAAATTCTCCAATGGAGGAGATTCTAATACTAGGAGAAAGGTTTTGCTGCAACATATTCAGAACCAAGCAACTATTTCTCACCAGAGTTATACAAGCTCTAGTCGCCGGATTCGTATTAGGGACTATATTTCTAAATGTTGGCAGCCGAAAAGGTCAAGTAGCCTTACAAACACGAAGTGGGTTTTTCGCTTTCACGCTTACCTTTCTGTTATCTTCAACAACAGAAGGCCTGCCAATTTTCCTAGAAGAGAGAAGGACATTGATGAAAGAGACCTCAAGAGGAGCTTACAGAGTTTCATCCTATGTTTTAGCAAACACACTTGTGTTCCTTCCTTTTCTTCTCTTggttggtcttctatattctacTCCAGTTTATTGGCTAGTAGGATTGAGGAAGGACATTGAAGGGTTCCTATACTTTTCTTTAGTGGTTTGGTTGGTGGTCCTTATGTCGAATTCTCTCGTCGCTTGTTTCAGTGCTCTGGTGCCAAATTTCATACTGGGAACCTCAGTGATTGCAGGTCTAATGGGTTCTTTCTTTCTGTTTTCAGGGTATTTCATATCAAAGGGAAACATACCTAGttactggattttcatgcactATATGAGTTTATTCAAGTACCCATTTGAGTGTTTTGTGATAAATGAGTATGGAGGAAAACAAGGGAGAAGTAGATGCTTAGATACTAGGAATGGAGAATGCAGTTTATATGGAGGTGAGTTCTTAAGACAGCAAGGTCTGAAAGAGTCACAAAAATGGAGCAATTTGGCTGTGATGTTGGGGTTCATAATTGGGTACAGAGTTATTTGCTTTTTGATTCTGTGGTGCAGATGCTACAGAACCAGAAAATAG 1731 0.405 MGSPFKPISCPRKTPYRIETKNLSYRLCRQIDGLTSSLCFCSNCPRRSGKLILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRVYPCEVSGQVLVNHRPMDSNRFRRTSGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKVAAARVAELMKELGLDQIADSRIGGGGGSNHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSLLRLMAFNQARLKIAGHCIPLHVNVLEFALDVLESLVIQTTESVNNQFLLRDKEEQVCKARMQYSMNVKEKALQYPNSPMEEILILGERFCCNIFRTKQLFLTRVIQALVAGFVLGTIFLNVGSRKGQVALQTRSGFFAFTLTFLLSSTTEGLPIFLEERRTLMKETSRGAYRVSSYVLANTLVFLPFLLLVGLLYSTPVYWLVGLRKDIEGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGNIPSYWIFMHYMSLFKYPFECFVINEYGGKQGRSRCLDTRNGECSLYGGEFLRQQGLKESQKWSNLAVMLGFIIGYRVICFLILWCRCYRTRK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0189 576 Gene3D - 37 293 IPR027417 -
Sto7g0189 576 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 283 IPR003439 GO:0005524
Sto7g0189 576 Pfam ABC-2 type transporter 299 510 IPR013525 GO:0016020|GO:0140359
Sto7g0189 576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 223 IPR027417 -
Sto7g0189 576 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 227 - -
Sto7g0189 576 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 226 568 - -
Sto7g0189 576 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Sto7g0189 576 Pfam ABC transporter 53 205 IPR003439 GO:0005524
Sto7g0189 576 SMART AAA_5 62 278 IPR003593 -
Sto7g0189 576 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 227 - -
Sto7g0189 576 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 226 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0189 Sto-Chr7 1396529 1398379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0189 45 219 Calmodulin-binding Proteins AT2G36910 28.492 5.38e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0189 K05681 - gmx:100776372 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0189 7 1396529 1398379 Sto7g0189 7 1396529 1398379 ECH