Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0188 ATGTGTGTACTCGTGTCCAAGCCTCCGAGAAAAAGAGGATCTATCTTGGCCACGCAACCGACCGAAATTGATATCGATGTTTCAGACATTCAGAATGTCAACCTTTACACTTACAACGAACTGCGAGTTGCCACCGAAGGTTTTAGTCCAGCAAACAAGATAGGACAGGGCGGTTTCGGATCTGTCTATAAGGGAAAGCTGAGAAATGGTACTCTAGCTGCTATAAAGGTGTTGTCTGCTGACTCGAGTCAAGGTGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACTACTATAGAGCACGAGAACCTAGTTAAGTTGTATGGATGCTGTGTGGATAAAAAGCAAAGGATTTTGGTATATGAGTATCTTGAGAACAATAGTCTAGCACAAACACTTTttgGTGGAGGCCATTGTAGCATCCAATTCGGCTGGCCTGTTCGGAGGAACATTTGCATCCGTGTTGCACGGGGAATTGCATTCCTTCATGAGGATGTTGAGCCACATATTATTCATAGAGATATCAAAGCAAGCAATATACTACTTGACAAAGACTTGCAGCCCAAAATCTCTGATTTTGGTCTTGCAAAGCTGATTTCACCAAACCTAACCCATATTAGTACACGCGTTGCAGGAACAGCACGGTTGCCTGCTGAAGAACAATATCTTCTTCCAAAGGCATGGAATATGTATGAAAGTGGGGAGTTAGAGAGTTTGGTGGATGCACTGCTAGAAGAGGACTTCAATATTGAGGAGGCATGTAGGTTTTGTAAGATTGGTCTCTTATGCACTCAGGATGCTCCTCAGCTTCGGCCATCCATGTCTACCGTGGTTGGCATGTTGATGGGTGAAATTGATGTGAATGAAAAAACGATTACAAGACCGGGCTTGCTATTTGATCTTGTAGATACCAAAGATGAAGGGAAACACAAGGCCAAGGGTGAAATGGGAAATACATCATTGCTTGCTGTCTCAGGGAAGCATTCTGATTCATCTTCGTCTGGAATCACATCCTCTTATGCTACCATGACCTTCACTTCGATTTATGACCGAAGCAATTAA 1062 0.4331 MCVLVSKPPRKRGSILATQPTEIDIDVSDIQNVNLYTYNELRVATEGFSPANKIGQGGFGSVYKGKLRNGTLAAIKVLSADSSQGVREFLTEIKVITTIEHENLVKLYGCCVDKKQRILVYEYLENNSLAQTLFGGGHCSIQFGWPVRRNICIRVARGIAFLHEDVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLISPNLTHISTRVAGTARLPAEEQYLLPKAWNMYESGELESLVDALLEEDFNIEEACRFCKIGLLCTQDAPQLRPSMSTVVGMLMGEIDVNEKTITRPGLLFDLVDTKDEGKHKAKGEMGNTSLLAVSGKHSDSSSSGITSSYATMTFTSIYDRSN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0188 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Sto7g0188 353 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
Sto7g0188 353 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Sto7g0188 353 SMART serkin_6 48 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0188 353 Gene3D Transferase(Phosphotransferase) domain 1 124 219 - -
Sto7g0188 353 Gene3D Transferase(Phosphotransferase) domain 1 220 297 - -
Sto7g0188 353 ProSiteProfiles Protein kinase domain profile. 48 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0188 353 Pfam Protein kinase domain 51 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0188 353 PANTHER RECEPTOR-LIKE KINASE 10 218 - -
Sto7g0188 353 PANTHER RECEPTOR-LIKE KINASE 221 339 - -
Sto7g0188 353 SUPERFAMILY Protein kinase-like (PK-like) 26 281 IPR011009 -
Sto7g0188 353 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 221 339 - -
Sto7g0188 353 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0188 Sto-Chr7 1393429 1396072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0188 36 300 Receptor kinase-like Gene Family AT1G56120 46.535 4.43e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto7g0188 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0188 - - gmx:100801735 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0188 7 1393429 1396072 Sto7g0188 7 1393429 1396072 ECH