Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0185 ATGTTACTCAGCAAAGAAATAGAGGATTTATGTGATGACAACTTTGAAGGATCTAATGATGAAAGACGGATTTTCACTGAGGTGTTTTTTGGTAAAGACATTGTTCAGTCTAGCCAGAGGTGTCTCGTTACCGGAGTTATCAACTTTGAATGTGAATCTACCAAAAACACAATTACATCATTTTGCTCTAGTAATGAAAACTCACTTATAAGCCCCTCGTCTTCAAAATTTATGCATCCTGAGGAGGATTATGATGTAATTCAGCATTGCAAAGAGACTGTTCTGGGTTTTATGCCAGAGAGATTCAATCACGAAGGTCAAAATGATGAGGATGCGAATGTCAAACGGATGAAATTTTCCCTGCATGAACTTCCCTGTAGTAGATCCAATTTGGAAAAGGTCTTGAGCTCAGCAACACTTTCAAAAGAATTTGTTACTGATATGTCTTGTGCTGCTGTAAACTATGATAGTAAACCAATTTCATTTCGTTTAGTTGAATCATCGAAGCATGGTGTGATATCCAGTTGTTATCTGTTGAAGCATAACACGACACTGAATAAAAGAACTGTTAAGGATGATTTATATGTtacaaattgtaaaaaaaactcTGCAAATGGAAATTTTGCAAAAGAAGTGGCTTCAAGTAAAGTCGTTGCTTCTCCTGTTTCCCAGGAGAGTTTTGCAAACAGGCTTGTAGTAACAAGTCCGTCAATCACTGCTGTGGAGAAGTATGGATCTCATTTATCTTCTGACATGGATATCTCAAATTTATCATTGGACTCGCCGACTAAAAAGAGCCATCGCGATGTACTGCATTTCCGTAGTGTTCAGTTGCTTATGATGGCAGGATGGTCTATTGAGAAGCGCAAGCGACCTTGCAGACGTCACGTAGAGTCTGTTTATAGGACACCAGAGGGAAGGCCAGTTCGTGAGTTTAAAAAAGCTTGGAAGTTATGTGGTCAGTTTTTGTCTGTTGACAAATACAATTTGGTGCAGGAAGACTGTAAGGAATGGGCTGATATCAGTCAATTCTGGTCTGATCTATCCAGTGCATTGACAAATGTTGAAAAAGAAATGAACCAGTCAGAACCTGCTGCTACGTTGGCTTATCAATGGTGGCTTTTGGATCCTTTCGTAGCagttgtttttattaaaaaacagaTTGGTGCACTGAAAAAAGGGGAGATAGTGAAAGTAACTCGAACTATACTTTCTAGTCAGTATAAGATTGCATGTACTGGCATTGGTTCATGTCAGGAGGATACTTCTGCTTCATTTGATCAGAAACACGACTTGGCTTTTCTTTTTGATTCTTCTACAGCCACTGGGAGCACAATAACACCTTCTGTGCTCAACTACCATACCTGTAGTCAGAAAACTGGTGATGAAAATATCTTAGGATGTGAACAGACAGTTAATGGGATTGTGAAACTTCCAACATGTGAATCTGTTAGTATTGGTAATGAGGAAGATTTGTACATAGGAAGTCAATGTAGGAAAATGCCTGTAAATGGAAGCAGCAGTATGGGTGTAGTCTCTTCATCTGATTATGGATCAGGTTTTAATGGTGCACAGTCAAGTACATGCACTTTTGATGTTCTTACAACTTCTGGAAATTCTAACTGCATATTTGAAGGGCTTAAAGTTAACACTTCTCATGaaagtaaaattagaaaatttgaaAGCTCTGATGACCAGTGTTTGGAagatttatttgaaaaaaataagagagtTGGAGATGTACCAACGGACAAGTCAGAGGAAAAGGATGTCTCAATTGAAGGCCAAGTGCAGAATCTCCTTGGTTATTTGAAGGAGCCCCTGAATAGTCAATCACAAGGAGTAAGCCATGGCCTGGTTCATTATCATGACTCGGAGGCTGTTCAGCAGTCTGATTTTGGGGAGCAAGAGGGTGGGAAAAGCTCAATAGCTTTTGTGCTTGAGACAGATAACCCAGGTTCTACCCCTGATGCTACTCCGAAAAAGAAGATTCGGAGGAAGTGTAAGAAGGTATCTGAAATCAAACACAGTATGTTTTATGAAAGTGACTTGATGGGCTCTACAGTTACTGATGAGGTTCAATTGCTGAATGGAGAGGCACGTGGATCTCAAGTAGAATTCGAAGAGGGCAACGAGTATCCAGTTGACGATGCAGAAAATAGAGGAACCCACGGGAAACCATCATCTATCAATTCGTTCCAGCAACATATTGGGAAAACAAATGCGAAGTCTGGAAAGACTTGTCGCAAGTATGACTCTGTAACTGAAAAACCAAAATCTAGTAGATGCCAGATTGAAGATGATGATCTGTTGGTTTCagctatttttaagaaaaagggtTTCATCTCAAAGACAACTCGAGGTAGTTCTAAATCTAAATCCAGCAAATCAAAAACCTGGAGAAAGCTGAAAAACCAGAAGGGTCATTGCAGGTTGCTACCAAGGAACCTTGGTAATGCAGGGAAGCGCATTAAGGATGGCAAGAGGTATTATCTAGGGCCTAGAACAGTGCTGTCCTGGTTGATTGATAATGGGATCATATCTTTAAATGATGTCATTCAATATCGAAACCTGAAAGATAATGCTGTTGTTAAGGATGGTAGGATTACCAGGGATGGTATTATATGCAAGTGTTGCAGTAAGTTGCTTGCGTTATCTGAGTTCAAGTTTCATGCTGGGTTTAGATTGAATCGCCCCTGCTTGAACCTTTTCATGGAGTCTGGTGAGCTCTTTACATTGTGCCTGCTTCAAGCTTGGTCAGCTGAATACAAGGCCAGGAAAAGTGGGAATCAAGCTGTGAaagctgatgatgatgataaaaacGATGACTCGTGTGGATTGTGTGGTGATGGGGGTGAGCTGATATGCTGTGATAACTGTCCATCGGCTTTTCATCTTGCTTGTTTGTCCACTCAGGAGATCCCTGAAGGGAACTGGTACTGCCCAAACTGCACTTGTCGGATATGTGAGAATTTTGTTAATGATAAAGAGGCTTCAGGTGACTATGATGCATTGCAGTGTGTACAGTGTGAGCATAAGTATCATGGGAAATGTCTGAATGGAAGAGATAAACCAGAAGAGGAGGTTTCTCACACTTGGTTTTGTGATAGCCGTTGTCAGGAGGTATACTCTGGTCTACAATCTCGGGTTGGGTTTGTTAATCATGTTGCTGATGGCTTCTCATGGATGCTTCTTAGATGCATCCATGATGACCAAAAAGTTCATTCTACCCAGTGGCTTGCCCTGAAGGCATTATGTAATACAAAAATAGCTGTTGCCCTTACCATCATGGAGGAGTGTTTTTTGTCAATGGTGGATCCAAGAACAGGCATAGACATGATACCCCATGTTTTATACAATTGGGGGTCTGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACTGTGGTATTGGAAAAACAGGATGTGTTAATTTCTGTAGCATCTATcagGGTGCATGGAACTACAGTTGCAGAGATGCCTCTTATTGCTACTTGCAGCCGGTATCGTCGCCAGGGAATGTGTCGACTCCTTGTGAGTGCAATTGAAGAGaTGTTAGTATCTCTCAAGGTAGCAAAGCTTGTGATAGCTGCTATTCCAGATTTAGTAGAAACATGGACCAAGGGTTTTCGATTTAAACCTGTGAGTGACATTGAAAAGCAGAGATTGAACAAAATCAACTTGATGGTTTTTCCTGGGACTGTATTACTTGAAAAACCCCTGTTCAAGGAGGAGAAAATAGaagCTGAAAGAGGACCTTGTGAGCCATCAACCTTGGCAACAGATGACACAACCGAAGTAGGTGTCTGTTTTAAAGGAATGGCTAAGTCAGAAGCTGAACAGATTTGCAGCGAGAATTACACAGATTATGGAGCTGAATCATTGCAACATACTGGAAATGCTTCTACTGATGTAATCGTTGCTAAGTCAGAAACTGAACAGGTTTGCGGCGAGAATTACACAGGCTATGGAGCTGAATCATTGCCGCAGGATGTCAAACACACTAGTAATGATGAAATTGGTGCTAAGTCAGAGAGTGAACATGTTTGCAGTAAGAATTTCCCAGACTACAGAGCTGGATGTGAAACCGGCATAGATGATTGTACATTAGCCGTTGAAAAATCTTTAGGATCCGAAGAAACATCGGAGGTAAGTTCTTAtttaagagaagagaagatcaTGAGCTTTTTGAAGCAATCTGGTGGCTCAGAGAAATCTATTGAAGTAAACAATATGCAGGAATTGAGAATCAGCAGAAAATTGGAAATCACAAATGGGTCTATACAGCAATATAGTGGGAAATGCTGTACTAACAAAGATGGTACTGAATCAGGAGGAAGGATTACTAAGGACATGAAGATCAAATTAGGTGAAGATCAGGAGAATGCCTTGCAGGGCCCTTTTTTGCAATTGTCCTGCAAAACAGTATTAGGCAGCAATTTTGACTTGGATTCCAAAATGGAATCCTCAGGGATGTATGATGAAACACAGCATTCTCAGAAAGTATGTGAGTTGAATGAATGA 4524 0.3957 MLLSKEIEDLCDDNFEGSNDERRIFTEVFFGKDIVQSSQRCLVTGVINFECESTKNTITSFCSSNENSLISPSSSKFMHPEEDYDVIQHCKETVLGFMPERFNHEGQNDEDANVKRMKFSLHELPCSRSNLEKVLSSATLSKEFVTDMSCAAVNYDSKPISFRLVESSKHGVISSCYLLKHNTTLNKRTVKDDLYVTNCKKNSANGNFAKEVASSKVVASPVSQESFANRLVVTSPSITAVEKYGSHLSSDMDISNLSLDSPTKKSHRDVLHFRSVQLLMMAGWSIEKRKRPCRRHVESVYRTPEGRPVREFKKAWKLCGQFLSVDKYNLVQEDCKEWADISQFWSDLSSALTNVEKEMNQSEPAATLAYQWWLLDPFVAVVFIKKQIGALKKGEIVKVTRTILSSQYKIACTGIGSCQEDTSASFDQKHDLAFLFDSSTATGSTITPSVLNYHTCSQKTGDENILGCEQTVNGIVKLPTCESVSIGNEEDLYIGSQCRKMPVNGSSSMGVVSSSDYGSGFNGAQSSTCTFDVLTTSGNSNCIFEGLKVNTSHESKIRKFESSDDQCLEDLFEKNKRVGDVPTDKSEEKDVSIEGQVQNLLGYLKEPLNSQSQGVSHGLVHYHDSEAVQQSDFGEQEGGKSSIAFVLETDNPGSTPDATPKKKIRRKCKKVSEIKHSMFYESDLMGSTVTDEVQLLNGEARGSQVEFEEGNEYPVDDAENRGTHGKPSSINSFQQHIGKTNAKSGKTCRKYDSVTEKPKSSRCQIEDDDLLVSAIFKKKGFISKTTRGSSKSKSSKSKTWRKLKNQKGHCRLLPRNLGNAGKRIKDGKRYYLGPRTVLSWLIDNGIISLNDVIQYRNLKDNAVVKDGRITRDGIICKCCSKLLALSEFKFHAGFRLNRPCLNLFMESGELFTLCLLQAWSAEYKARKSGNQAVKADDDDKNDDSCGLCGDGGELICCDNCPSAFHLACLSTQEIPEGNWYCPNCTCRICENFVNDKEASGDYDALQCVQCEHKYHGKCLNGRDKPEEEVSHTWFCDSRCQEVYSGLQSRVGFVNHVADGFSWMLLRCIHDDQKVHSTQWLALKALCNTKIAVALTIMEECFLSMVDPRTGIDMIPHVLYNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRLLVSAIEEMLVSLKVAKLVIAAIPDLVETWTKGFRFKPVSDIEKQRLNKINLMVFPGTVLLEKPLFKEEKIEAERGPCEPSTLATDDTTEVGVCFKGMAKSEAEQICSENYTDYGAESLQHTGNASTDVIVAKSETEQVCGENYTGYGAESLPQDVKHTSNDEIGAKSESEHVCSKNFPDYRAGCETGIDDCTLAVEKSLGSEETSEVSSYLREEKIMSFLKQSGGSEKSIEVNNMQELRISRKLEITNGSIQQYSGKCCTNKDGTESGGRITKDMKIKLGEDQENALQGPFLQLSCKTVLGSNFDLDSKMESSGMYDETQHSQKVCELNE 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0185 1507 Pfam Tify domain binding domain 867 917 IPR032308 -
Sto7g0185 1507 Pfam PHD-finger 945 986 IPR019787 -
Sto7g0185 1507 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 929 999 IPR013083 -
Sto7g0185 1507 ProSiteProfiles Zinc finger PHD-type profile. 942 987 IPR019787 -
Sto7g0185 1507 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1080 1242 IPR000182 GO:0016407
Sto7g0185 1507 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1091 1205 IPR016181 -
Sto7g0185 1507 CDD PHD1_AIRE 945 984 - -
Sto7g0185 1507 PANTHER INCREASED DNA METHYLATION 1 1325 1501 - -
Sto7g0185 1507 PANTHER INCREASED DNA METHYLATION 1 1 1289 - -
Sto7g0185 1507 SUPERFAMILY FYVE/PHD zinc finger 937 991 IPR011011 -
Sto7g0185 1507 PANTHER PHD FINGER PROTEIN 12 1325 1501 IPR042163 GO:0003714|GO:0045892
Sto7g0185 1507 PANTHER PHD FINGER PROTEIN 12 1 1289 IPR042163 GO:0003714|GO:0045892
Sto7g0185 1507 SMART PHD_3 986 1040 IPR001965 -
Sto7g0185 1507 SMART PHD_3 944 985 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0185 Sto-Chr7 1371502 1379246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0185 160 401 PHD Transcription Factor Family AT3G14980 39.683 6.09e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto7g0185 TDBD 3.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0185 - - lja:Lj3g3v1061160.1 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0185 7 1371502 1379246 Sto7g0185 7 1371502 1379246 ECH