Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0129 ATGAAGATTCAGTGTAACGTCTGTGAGGGTGCGGAGGCCAAGGTGCTGTGCTGCGCGGACGAGGCGGCTCTGTGTTGGGATTGTGACGACAAGGTTCATGCTGCTAACAAGCTCGCTGGCAAGCACCAGAGAgttactctttcttcttcttcttcctctcacaTGCCCAAATGTGATATTTGTCAGGAAACATTTGGTTATTTCTTCTGTCTAGAGGACCGGGCTTTACTCTGCAGAAAATGTGATGTGGCAATACACACCGCAAATTCCTATGTCTCAACTCACCAGAGGTTTCTGCTCACTGGTGTAAGAGTAGGACTTGAAACTACTGACCCTGGTGCTTCCTCTTCTTCTGCTAAGTCACAGTCTGAGGAGAAAATGTCAGACACAAAATCTTCTTCTGCCTCTAAAAAAGTTTCCTCAATACCTGAATCATCTGAATACAATGAAGTGTTAGCCGTCCAAGGTGGAGGAGATGGGAAGTTTCCTCCGACTAAGGTGTCATATGGCGGTGGTTCTTCAGCTGGAAACATCTCAAACTGGCCCATTGATGAATTTCTCGGTTTTAATGAATTCAGTCAGAATTATAATTACATGGACAGAGGACCATCCAAGGCTGACAGTGGTAAGATTGGGGATTGCGATTCGCCTAGTTTGATATCTAGTGAAGAGGAAATAGACGACGATGATGACTGCTTGGGCCGGGTTCCGGATTCATCGTGGATGGTTCCTCAGAATCAGATCTCTTCCCCTCCTACAGCTTCAGGGTTATATTGGCCAAAAGACCCCAAATATTCATCTGATAGTGCTGTGCTATATGATTCTTATCTCTGCAACTACTATCCTTCTTTTGAGCAATTCAAGTTGATTAGCTTCATGTTTCTGTTCATGGTTGTCTCAATTAAGATCGATCTTGCAGCATTCTTCAGTTCAAGAATCGGTTCTATTAGCTCTCTTCTTTCTATCAAGTTCTGTAATTGCAGCAAGAAGGGCGGTAAACTATGA 1005 0.4299 MKIQCNVCEGAEAKVLCCADEAALCWDCDDKVHAANKLAGKHQRVTLSSSSSSHMPKCDICQETFGYFFCLEDRALLCRKCDVAIHTANSYVSTHQRFLLTGVRVGLETTDPGASSSSAKSQSEEKMSDTKSSSASKKVSSIPESSEYNEVLAVQGGGDGKFPPTKVSYGGGSSAGNISNWPIDEFLGFNEFSQNYNYMDRGPSKADSGKIGDCDSPSLISSEEEIDDDDDCLGRVPDSSWMVPQNQISSPPTASGLYWPKDPKYSSDSAVLYDSYLCNYYPSFEQFKLISFMFLFMVVSIKIDLAAFFSSRIGSISSLLSIKFCNCSKKGGKL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0129 334 SMART bboxneu5 53 100 IPR000315 GO:0008270
Sto7g0129 334 SMART bboxneu5 4 47 IPR000315 GO:0008270
Sto7g0129 334 Pfam B-box zinc finger 55 96 IPR000315 GO:0008270
Sto7g0129 334 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 274 - -
Sto7g0129 334 CDD Bbox1_BBX-like 57 100 - -
Sto7g0129 334 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 274 - -
Sto7g0129 334 MobiDBLite consensus disorder prediction 110 142 - -
Sto7g0129 334 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto7g0129 334 Gene3D Classic Zinc Finger 1 94 - -
Sto7g0129 334 CDD Bbox1_BBX-like 5 47 - -
Sto7g0129 334 MobiDBLite consensus disorder prediction 202 229 - -
Sto7g0129 334 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0129 Sto-Chr7 999137 1002206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0129 1 261 C2C2-CO-like Transcription Factor Family AT1G78600 50.676 9.73e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Sto7g0129 zf-B_box 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0129 - - gmx:100790959 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0129 7 999137 1002206 Sto7g0129 7 999137 1002206 ECH