Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0125 ATGCCTGGGAATAAGTATAACGGTAATTCTAATCACATTCCAGGTCGTGTTGAACGACTTTTAAGAGAAAGAGAGCTAAGAAAAAGCAGCAGGGCTTCTCATTTGAATGAGTCAAATGATTATAATAGTAGGGTTCCTGAACCTTTAGAGCATGACCTGCGTTTAAGAGAAGACAATAACTCAAGTGCTTCCCATGTTGAACAATTCCTGGAAGGGGCTGCAAGGGCACTAAGTGAGGGATGTGAAAGACAAGATGGGAAGCCTTTTAGACAACGACTTTTGGTTGTGGCCAACAGGCTGCCAGTCTCAGCAATTAGGAGAGGTGAAGACTCATGGTCTTTAGAGATAAGTGCTGGAGGTCTAGTTACCGCTCTTTTAGGTGTGAAGGAGTTTGAGACAAGGTGGATAGGTTGGGCTGGTGTCAACGTGCCTGACGAGATTGGACAGAAGGCACTTACCAAAGCTTTGGCTGAGAAGAGGTGCATTCCTGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGCTACTGCAACAACATATTGTGGCCCCTTTTTCATTACCTTGGACTGCCTCAAGAAGATCGCCTTGCTACCACACGAAGTTTTCAGTCTCAATTTGCAGCATATAAAAAAGCCAATCAAATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTATCATCTTATGTTTCTCCCAAAATGTTTAAAGGATTATAACAGCAAAATGAAAGTTGGGTGGTTTCTTCACACCCCATTTCCATCTTCAGAAATTCATAGGACATTACCATCTCGTTCAGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCACGCCATTTTGTTAGCGCCTGTACTCGCATTCTTGGACTTGAGGGCACGCCTGAAGGGGTTGAGGATCAAGGGAGGCTGACTCGAGTTGCTGCTTTTCCTATTGGTATAGACTCAGATCGATTCAGATGTGCACTTGAGCTTCCTCAAGTCCAGGATCACATCAGAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGCGTCGATCGCCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTAGCATTCGAAAAATTTTTGGAAGAGAATGCTTGTTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACTAGGACGGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCACGAAATTGTTGGTCGAATTAATGGAAGATTCGGAACATTGACTGCTGTTCCTATACATCACCTGGATCGTTCTCTTGACTTTCAGAAGTTATGTGCTTTATATGCTGTTACTGATGTAGCACTGGTTACATCTTTGAGGGACGGAATGAATCTTGTCAGTTACGAATTTGTGGCTTGCcaggagaaaaagaaaggagtTCTCATTCTTAGTGAATTTGCTGGTGCTGCGCAGTCTCTAGGTGCTGGAGCAATTCTCGTGAACCCCTGGAACATTACAGAAGTTGCTGCTGCTATTGCTCAGGCTCTAAATATGTCATCTGGGGAAAGAGAGAAGCGACATAAGCATAACTATGTACACGTAACAACCCACACTGCTCAGGAATGGGCAGAGACTTTTGTAAGCGAACTAAATGATACTGTTGTAGAGGCACAACTAAGGACAAGACAAGTTCCGCCTCCACTTCCAACTGAGATTACAATTGAACGCTATCTGCAGTCAACTAATCGATTGCTTATTTTGGGGTTCAATGCGACTCTAACTGAACCAGTTGAAAAGAAAGGTGACCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTAAAACTACCCTTGACAGCACTTTGCAGTGACCCAAAGACCACAATTGTTGTGCTTAGCGGGAGTGGTAGAAATGTCTTATATAATAACTTTAAGGAATACAACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACGCCCTGCAAAGGGAGAATGGATGACAACAATGCCCGAGCACCTGAATATGGAATGGGTGGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCCCGGTCTCATTTTGATTTTGAAGAAAGGGAAACCTCACTTGTATGGAATTATAAGTATGCAGATGTTGAATTTGGAAGACTTCAAGCAAGGGACATGTTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAGTAGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGATCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGACAGCGCCAATCGATTATGTACTTTGTATAGGACATTTTCTATCTAAGCAGGATGAAGATGTTTATACTTTCTTTGAGCCGGAGCTTCCTTCTGGCGGTGTGGGCGTTCCACGAGCCAAGGTAACGGATGCAGTCAAGTTCCCTGTTGAGAGAAGATCATCTCTGAAAATTCCAGCCACTACTAAAAGTGGACCCAAGTCATCTCAAAGCAAGCCACAGCGGCCTCTGTCCAATTCTGAGAAgaaaaccacaaaccatatCTGTAGTGCACAAAGGCGGCCAGCACCTGAGAAAATCTCATGGAATGTGCTTGACCTCAAGAAGGAGAACTACTTCTCTTGCGCCGTTGGCCGAACTCGGACAAATGCTCGGTATACTCTCGGATCTTCGGATGACGTTGTTGCATTTCTGAAGGAACTGGCTCAGGCATCTcctctaaattattttttaaggaattaa 2805 0.4235 MPGNKYNGNSNHIPGRVERLLRERELRKSSRASHLNESNDYNSRVPEPLEHDLRLREDNNSSASHVEQFLEGAARALSEGCERQDGKPFRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVTALLGVKEFETRWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKDYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRCALELPQVQDHIRELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENACWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFQKLCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMSSGEREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTEITIERYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKLPLTALCSDPKTTIVVLSGSGRNVLYNNFKEYNMWLAAENGMFLRPAKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTAPIDYVLCIGHFLSKQDEDVYTFFEPELPSGGVGVPRAKVTDAVKFPVERRSSLKIPATTKSGPKSSQSKPQRPLSNSEKKTTNHICSAQRRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVAFLKELAQASPLNYFLRN 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0125 934 Gene3D Glycogen Phosphorylase B; 84 338 - -
Sto7g0125 934 Pfam Trehalose-phosphatase 612 825 IPR003337 GO:0003824|GO:0005992
Sto7g0125 934 MobiDBLite consensus disorder prediction 27 47 - -
Sto7g0125 934 MobiDBLite consensus disorder prediction 838 873 - -
Sto7g0125 934 CDD HAD_TPP 590 810 - -
Sto7g0125 934 CDD GT20_TPS 92 557 IPR001830 GO:0003824|GO:0005992
Sto7g0125 934 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 923 IPR001830 GO:0003824|GO:0005992
Sto7g0125 934 Gene3D - 729 929 IPR023214 -
Sto7g0125 934 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 560 - -
Sto7g0125 934 Gene3D Glycogen Phosphorylase B; 339 541 - -
Sto7g0125 934 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 923 - -
Sto7g0125 934 SUPERFAMILY HAD-like 589 923 IPR036412 -
Sto7g0125 934 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 92 557 IPR012766 GO:0003825|GO:0005992
Sto7g0125 934 MobiDBLite consensus disorder prediction 838 872 - -
Sto7g0125 934 Pfam Glycosyltransferase family 20 92 557 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0125 Sto-Chr7 950886 961217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0125 1 926 Trehalose Biosynthesis Gene Families AT1G78580 79.471 0.0 1505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0125 K16055 - gmx:100797320 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0125 7 950886 961217 Sto4g2751 4 28478893 28490032 ECH
Sto7g0125 7 950886 961217 Sto7g0125 7 950886 961217 ECH