Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0104 atgaGGTTGCTGAGTAATCTAGGACAATGGAGAAGCGTCGCGAAGGAAGTAGTGGATCGCACAATGATTGCGGTGAAGTTCCTCTGCTTCCTTCACGTGACCAACAACTACGTTTGCACCGCTACTCATGTCTACGGGCCTAGTATGCTTCCCACTTTGAATCTCACCGGTGATGTTTTAATCGCGGAGCGTGTGTCTCCTCGGCTAGGGAAGCTTGGGCCTGGAGATTTGGTGCTCGTTCGCTCTCCTGTGAACCCTAATCGGATTGTGACCAAGCGGATCGTCGGCAGGGAAGGGGATAGGGTCACTTATTATGACCCCAGGCACGGTGATATAGCTCAAACTGCTGTGGTGCCAAAGGGGCATGTTTGGATTCAGGGGGATAACATCTATGTCTCCTGCGATTCAAGACATTTTGGTCCTGTTCCTTATGGTCTTATAGAAGGGAAAGTGTTTTTCAGGGCTTGGCCACCTGATGGTTTCGGACGGCTGGGTTATTGA 501 0.505 MRLLSNLGQWRSVAKEVVDRTMIAVKFLCFLHVTNNYVCTATHVYGPSMLPTLNLTGDVLIAERVSPRLGKLGPGDLVLVRSPVNPNRIVTKRIVGREGDRVTYYDPRHGDIAQTAVVPKGHVWIQGDNIYVSCDSRHFGPVPYGLIEGKVFFRAWPPDGFGRLGY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0104 166 Gene3D Umud Fragment, subunit A 34 163 - -
Sto7g0104 166 Pfam Signal peptidase, peptidase S26 114 156 IPR019533 GO:0004252|GO:0006465
Sto7g0104 166 Pfam Signal peptidase, peptidase S26 23 106 IPR019533 GO:0004252|GO:0006465
Sto7g0104 166 CDD S26_SPase_I 44 151 IPR019533 GO:0004252|GO:0006465
Sto7g0104 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto7g0104 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto7g0104 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto7g0104 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Sto7g0104 166 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 4 163 - -
Sto7g0104 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0104 Sto-Chr7 775212 777548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0104 49 165 MADS-box Gene Family AT1G29960 54.237 5.10e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0104 K09647 - csv:101214382 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0104 7 775212 777548 Sto7g0104 7 775212 777548 ECH