Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0051 ATGACTTGttgttttcctttcttatttGGTAAAAGGATTAAATCTTCAGTGATACGAGATCCTGATATTGATGAAGAATTTTCAGGCATTCAAAATGTTATACTTTATACCTACAATGAACTAAGAGTTGCCACTGACGATTTCAGTCCAGCCAACAAAATTGGGGAGGGTGGTTTTGGTTCTGTCTATAAGGCACGGCTAAAAGACGGGAAAATGGCTGCTGTTAAAGTTCTTGCAGCTGAATCAAGACAAGGGGTGAAGGAATTCTTGACAGAGATTAACGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGTTATACGGATGTTGTGTGGAAGGAAATCACAGAATATTAGTTTACAATTACCTTGAGAATAACAGCCTTGCACAAACTCTTCTAGGTGGAGGTTACAGTAATATCCACTTCAACTGGCAAACAAGGACTAGAATATGCATTGGGATTGCCCGTGGGCTGGCCTTTCTTCATGAGGAACTAAGACCACATATTGCTCATAGAGATATAAAAGCAAGCAATATTCTTCTTGATAAAGACCTTACACCTAAGATTTCAGATTTTGGGCTTGCAAAGCTTATCCCAGCAAATGTGACTCATGTCAGTACACGTGTAGCCGGGACAATGGGCATTATACTGCTAGCTTGTGCTGAGATTAAGCAGAATTACAGGCTATTTTGTTGGGGAAAAGGCTATTTGGCTCCAGAGTATGCAATAAGGGGGCAGCTTACACGGAAAGCAGACATATACAGTTTTGGTGTACTCCTTGTGGAGATTGTCACCGGGAGATGCAATACAAATGCACGATTACCAGCAGGAGAACAGTACCTTATAGAAAGGACATGGACACTTTATGAGCAAGGGGAATTGGCAAGGCTGGTGGACGTATCCCTAAATGGGGAATTTGATGCCGAGGAGGCTTGTAAGTTTCTGAAGATTGGTCTTCTTTGCACTCAGGATGTTCCGAAATTCCGGCCATCCATGTCTTCTGTGGTCAAGATGCTCACTGGTGAAATGGATGTAGATGACAGTAAGATAACGAACCCAGGCTTGATTTCTGATTTTATGGACCTTAAAGTTGGAGTTAAACCAAAAAGTAATGTTGATATGAAGATTTTATCTTCATATAATGCATCCTCTGCCTCAGACAACCAAGATACTACTATGACATCGGCTGCTTCAACTGCTGCAACTACAACCTTCACTGCACAGTATTGTAGCCCGTAA 1242 0.4066 MTCCFPFLFGKRIKSSVIRDPDIDEEFSGIQNVILYTYNELRVATDDFSPANKIGEGGFGSVYKARLKDGKMAAVKVLAAESRQGVKEFLTEINVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGGYSNIHFNWQTRTRICIGIARGLAFLHEELRPHIAHRDIKASNILLDKDLTPKISDFGLAKLIPANVTHVSTRVAGTMGIILLACAEIKQNYRLFCWGKGYLAPEYAIRGQLTRKADIYSFGVLLVEIVTGRCNTNARLPAGEQYLIERTWTLYEQGELARLVDVSLNGEFDAEEACKFLKIGLLCTQDVPKFRPSMSSVVKMLTGEMDVDDSKITNPGLISDFMDLKVGVKPKSNVDMKILSSYNASSASDNQDTTMTSAASTAATTTFTAQYCSP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0051 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Sto7g0051 413 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Sto7g0051 413 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 399 - -
Sto7g0051 413 Pfam Protein kinase domain 51 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0051 413 SUPERFAMILY Protein kinase-like (PK-like) 27 340 IPR011009 -
Sto7g0051 413 SMART serkin_6 48 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0051 413 PANTHER - 3 399 - -
Sto7g0051 413 ProSiteProfiles Protein kinase domain profile. 48 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0051 413 CDD STKc_IRAK 54 342 - -
Sto7g0051 413 Gene3D Phosphorylase Kinase; domain 1 15 123 - -
Sto7g0051 413 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0051 Sto-Chr7 460663 463292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0051 19 410 Receptor kinase-like Gene Family AT1G53440 45.547 8.36e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto7g0051 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0051 - - cit:102628635 582.408