Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0036 ATGGACGATTCATTGGAAACATGGCTTCATGAActtGAAATGGATGATCCTTATAAGAGTTTGTTCCCAGAATTAAGCAGTATGATGTATGATTCTTCTTGTTCTTCAGGTGTTGAAGTGGAAATTACAAAGAAGCAAAAGGATAGTGATGATCATGAATTGGCAGAGAAATTGTATGATGAGAATTATGATCAAACTAATAATTCTATTGTTTTCAGTACTGTTCCTAATCCTAAGGAGATGGAGCCACTTAGTTTTCAGCACTTCAATAATGGAGATTATAGTAATAATAAGGATTTTGCTAACACTAATGATCTTCACTTCCAAGAGATTAAACCTGCAATGAATTGGATTGAGTTTGATGGCCAATTAGGAGGAGACACCTGGAAAAACAAAGTGACAACTTTGCCCCTTCCACACCACATAGTAGTGGAGAGAAAGCGAAGACAGGACCTTAACCATAGGTTTTTGGATCTTTCCAAAGTGATTCCAGGCAAGAAGAAGGCGTCCATCCTTGGGGATGCAGTGAACTACATGATAGATCTTCAAGAACGCATCAAGAAGCTTGAGGACAAAAGCAAGAAGAAAGTTGTGGAATCTGTGGTTTTTAAGCACAagagatcatcatcatcaaatgaCGACAACTTCAGCAACGGAAAAAGCAGGGCGTTGCAAGAAATAGAAGCAAAAGTTATAGAGACGGAGAAGAGTGTTCTCATTCGAGTTCATTGTGAGAATAATGTGAAGAGCAAAGCAATCCTTCCAACATTGTTGACTCAAATACCAAAGCTTCACTTACTTGTTCTCACTACTAACGTTGTGCCTTTTGGCATCCATACTGACATTACACTTATTGCTCAGATGGAAGCTGATTTCTGCATGAAAACAAAGGATATTGTGGAATATCTGCGATttcatttgaattaa 927 0.3679 MDDSLETWLHELEMDDPYKSLFPELSSMMYDSSCSSGVEVEITKKQKDSDDHELAEKLYDENYDQTNNSIVFSTVPNPKEMEPLSFQHFNNGDYSNNKDFANTNDLHFQEIKPAMNWIEFDGQLGGDTWKNKVTTLPLPHHIVVERKRRQDLNHRFLDLSKVIPGKKKASILGDAVNYMIDLQERIKKLEDKSKKKVVESVVFKHKRSSSSNDDNFSNGKSRALQEIEAKVIETEKSVLIRVHCENNVKSKAILPTLLTQIPKLHLLVLTTNVVPFGIHTDITLIAQMEADFCMKTKDIVEYLRFHLN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0036 308 Coils Coil 172 199 - -
Sto7g0036 308 Gene3D - 139 202 IPR036638 GO:0046983
Sto7g0036 308 Pfam Helix-loop-helix DNA-binding domain 141 183 IPR011598 GO:0046983
Sto7g0036 308 SMART finulus 142 188 IPR011598 GO:0046983
Sto7g0036 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 203 IPR036638 GO:0046983
Sto7g0036 308 PANTHER BHLH TRANSCRIPTION FACTOR 41 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0036 Sto-Chr7 370929 373032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0036 141 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.331 1.47e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto7g0036 HLH 3.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0036 - - tcc:18611377 149.828